RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 SPATA19Q7Z5L4 167 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 RASAL3Q86YV0 1011 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CACTIN-AS1Q8N1I8 211 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TMBIM1Q969X1 311 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 FCRL5Q96RD9 977 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NFKBIZQ9BYH8 718 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CLN6Q9NWW5 311 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CD36P16671 472 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 CYP2A7P20853 494 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ELK4P28324 431 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 RAB39AQ14964 217 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 TPGS1Q6ZTW0 290 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 TRPV3Q8NET8 790 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 OR6K2Q8NGY2 324 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 KCNK13Q9HB14 408 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 MAP10Q9P2G4 905 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 IGSF6O95976 241 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ITGA1P56199 1179 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 RAB15P59190 212 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 PHC1P78364 1004 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ABATP80404 500 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 MEP1AQ16819 746 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ELMSAN1Q6PJG2 1045 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 VN1R5Q7Z5H4 357 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 HOMEZQ8IX15 550 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ARRDC4Q8NCT1 418 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 TMEM159Q96B96 161 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 APOLD1Q96LR9 279 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 GFM1Q96RP9 751 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 C2orf49Q9BVC5 232 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 EIF2B4Q9UI10 523 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SLC25A13Q9UJS0 675 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 GSTK1Q9Y2Q3 226 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 A0A1B0GUL6 1792 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 FAM240BA0A1B0GVZ2 78 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 HAT1O14929 419 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SLC22A2O15244 555 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SNX4O95219 450 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SNAP29O95721 258 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 OR56A5P0C7T3 313 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 POU2F1P14859 743 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 FUT4P22083 530 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 PRKACGP22612 351 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ATP12AP54707 1039 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 KLHL12Q53G59 568 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 OGFRL1Q5TC84 451 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 NEK5Q6P3R8 708 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 CLIP4Q8N3C7 705 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 OR7D4Q8NG98 312 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 PRICKLE1Q96MT3 831 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SP140LQ9H930 580 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SLC2A6Q9UGQ3 507 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 CCDC162PA2VCL2 907 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 CCRL2O00421 344 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 IRAK2O43187 625 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 SLC7A4O43246 635 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 UGT2B11O75310 529 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 HLA-DQB2P05538 268 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 IFI30P13284 250 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 ETV4P43268 484 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 GK3PQ14409 553 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 PAFAH1B3Q15102 231 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 RBM20Q5T481 1227 aaKnown RBP11.43□□□□□ -0.58
VPS33A-201ENST00000267199 FAM151BQ6UXP7 276 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 GPR65Q8IYL9 337 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 HERC2P3Q9BVR0 1158 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 MAGEE1Q9HCI5 957 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 LYVE1Q9Y5Y7 322 aa11.43□□□□□ -0.58
VPS33A-201ENST00000267199 USP54Q70EL1 1684 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 GOT2P00505 430 aaKnown RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 YBEYP58557 167 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 LAPTM4AQ15012 233 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 FAM174BQ3ZCQ3 159 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PTCHD4Q6ZW05 846 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 MUS81Q96NY9 551 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 AP3M1Q9Y2T2 418 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PCDHGC4Q9Y5F7 938 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 HEMK1Q9Y5R4 338 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SAGE2PA6NJ88 616 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 H3BNH8 94 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SUV39H1O43463 412 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 GABBR2O75899 941 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 CDK4P11802 303 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SERPINA4P29622 427 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 MAGEA8P43361 318 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms