RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TTC9Q92623 222 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ZNF669Q96BR6 464 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 ZHX1-C8orf76Q96EF9 292 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TBATAQ96M53 351 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PCYT2Q99447 389 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PHOX2BQ99453 314 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ST6GALNAC4Q9H4F1 302 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 VTI1BQ9UEU0 232 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 KCNH4Q9UQ05 1017 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 WBP11Q9Y2W2 641 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SNX5Q9Y5X3 404 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 UBFD1O14562 309 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 PRMT5O14744 637 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 MITFO75030 526 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 MT-ND2P03891 347 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 MYL3P08590 195 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SLC35E2BP0CK96 405 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 C7P10643 843 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PGAM1P18669 254 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 IMPDH1P20839 514 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 GPX3P22352 226 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 DNAJB1P25685 340 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 NUDT1P36639 197 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TNFSF9P41273 254 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SERPINB10P48595 397 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ALDH3A2P51648 485 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TPD52P55327 224 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 MYL6P60660 151 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 NKG7Q16617 165 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ZNF404Q494X3 552 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 KIAA1324Q6UXG2 1013 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 SLC41A1Q8IVJ1 513 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 LINC00469Q8N7U9 141 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 OR52K1Q8NGK4 314 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 UBE2FQ969M7 185 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 DACT3Q96B18 629 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 PARK7Q99497 189 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 MRPL40Q9NQ50 206 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 ANKEF1Q9NU02 776 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 A0A0J9YYE9 177 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 EFCAB9A8MZ26 197 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 APOL1O14791 398 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 PGK1P00558 417 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 INSRRP14616 1297 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CD53P19397 219 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 LIPAP38571 399 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 SLC12A2P55011 1212 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CDH8P55286 799 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 OR4D2P58180 307 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CLDN10P78369 228 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 RHAGQ02094 409 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 GHRHRQ02643 423 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 MADCAM1Q13477 382 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 FSCN1Q16658 493 aaKnown RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 CCDC14Q49A88 953 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 IGSF11Q5DX21 431 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 LDLRAD1Q5T700 205 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 SHEQ5VZ18 495 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 FAM122CQ6P4D5 195 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 DPY19L3Q6ZPD9 716 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TRIM48Q8IWZ4 208 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 LRRC20Q8TCA0 184 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 HERVK_113Q902F9 699 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 RORBQ92753 470 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TRIM63Q969Q1 353 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 VPS39Q96JC1 886 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TEX37Q96LM6 180 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CPNE1Q99829 537 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 APOL2Q9BQE5 337 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 BDH2Q9BUT1 245 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 SLC25A23Q9BV35 468 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.02
VAPB-201ENST00000265619 MROH8Q9H579 483 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 IGSF5Q9NSI5 407 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 SETD4Q9NVD3 440 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ANAPC2Q9UJX6 822 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CFL2Q9Y281 166 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 HTTP42858 3142 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ASPDHA6ND91 283 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 DFFAO00273 331 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 PRLP01236 227 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 PSMB4P28070 264 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 RAPSNQ13702 412 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CAPSQ13938 189 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 GRB7Q14451 532 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ZNF267Q14586 743 aaPredicted RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ESCO2Q56NI9 601 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ATF7IP2Q5U623 682 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CYS1Q717R9 158 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 RIMKLAQ8IXN7 391 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 UBE2J2Q8N2K1 259 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ZMIZ2Q8NF64 920 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 GRPEL2Q8TAA5 225 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms