RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HID1Q8IV36 788 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 GSPT2Q8IYD1 628 aaKnown RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 SLC25A45Q8N413 288 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 OR2L2Q8NH16 312 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 GDAP1Q8TB36 358 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 CDKL2Q92772 493 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TCEAL3Q969E4 200 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 OR2M4Q96R27 311 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 CPNE1Q99829 537 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 LRRC61Q9BV99 259 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 SLC13A1Q9BZW2 595 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 CLPBQ9H078 707 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TMEM168Q9H0V1 697 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TCEAL2Q9H3H9 227 aaPredicted RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 GAREM1Q9H706 876 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 ARFGAP3Q9NP61 516 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 DNAJC28Q9NX36 388 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 SPASTQ9UBP0 616 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 SLC23A2Q9UGH3 650 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 PSAT1Q9Y617 370 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 A0A087WUV0 522 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 A6NCN8 305 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 H3BM21 787 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SCAMP1O15126 338 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 POP7O75817 140 aaKnown RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 OR56A5P0C7T3 313 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 PKMP14618 531 aaKnown RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 DGKAP23743 735 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 AKT1P31749 480 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CSRP3P50461 194 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 ARHGAP8P85298 464 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CTBSQ01459 385 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 RPA4Q13156 261 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 GTF2H3Q13889 308 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SLC29A2Q14542 456 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 ELOCQ15369 112 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CTSL3PQ5NE16 218 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 AGAP9Q5VTM2 703 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CNSTQ6PJW8 725 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 OGFOD3Q6PK18 319 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 PRR23CQ6ZRP0 262 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 AMZ2Q86W34 360 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 C17orf82Q86X59 251 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SLC44A1Q8WWI5 657 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 KCNJ9Q92806 393 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CCM2Q9BSQ5 444 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 RHOJQ9H4E5 214 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SMOC1Q9H4F8 434 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 CARS2Q9HA77 564 aaKnown RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 APOBEC3BQ9UH17 382 aaKnown RBP14.04□□□□□ -0.16
SSBP1-201ENST00000265304 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF180Q9UJW8 692 aa14.04□□□□□ -0.16
SSBP1-201ENST00000265304 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 KPNA5O15131 536 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 GPC4O75487 556 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 ACSL3O95573 720 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 FTH1P02794 183 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 NUDT17P0C025 328 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 AOAHP28039 575 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 GP5P40197 560 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 CD151P48509 253 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 MPP1Q00013 466 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 PLOD1Q02809 727 aaPredicted RBP14.03□□□□□ -0.16
SSBP1-201ENST00000265304 CCDC6Q16204 474 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 GRTP1Q5TC63 336 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 DOK6Q6PKX4 331 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 MINDY1Q8N5J2 469 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF548Q8NEK5 533 aaPredicted RBP14.03□□□□□ -0.16
SSBP1-201ENST00000265304 HM13Q8TCT9 377 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 PANX3Q96QZ0 392 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 RBBP8Q99708 897 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
SSBP1-201ENST00000265304 PPCSQ9HAB8 311 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 IL21RQ9HBE5 538 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 FBXO6Q9NRD1 293 aaPredicted RBP14.03□□□□□ -0.16
SSBP1-201ENST00000265304 ZNHIT2Q9UHR6 403 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 GNPTGQ9UJJ9 305 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 ACSL5Q9ULC5 683 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 PCM1Q15154 2024 aa14.03□□□□□ -0.16
SSBP1-201ENST00000265304 HMX2A2RU54 273 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 NEMP2A6NFY4 417 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 OR2AG2A6NM03 316 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 LIN7AO14910 233 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-201ENST00000265304 YY2O15391 372 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 AQP9O43315 295 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 SLCO2B1O94956 709 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-201ENST00000265304 GCAP28676 217 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 HSD17B3P37058 310 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
SSBP1-201ENST00000265304 GNPDA1P46926 289 aa14.02□□□□□ -0.17
SSBP1-201ENST00000265304 CCT8P50990 548 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms