RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TMTC4Q5T4D3 741 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 Q6ZSR9 355 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CDC26Q8NHZ8 85 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CYGBQ8WWM9 190 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 NSMCE2Q96MF7 247 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 HHIPQ96QV1 700 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 HOPXQ9BPY8 73 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 SPAG4Q9NPE6 437 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
RPA1-201ENST00000254719 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 PCDHA9Q9Y5H5 950 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 A0A1W2PQ45 241 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 A0A1W2PQY0 241 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 C2orf78A6NCI8 922 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 A8MU76 341 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 BNIP3LO60238 219 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 LDLRP01130 860 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 GNAO1P09471 354 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CCDC166P0CW27 439 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 IL2P60568 153 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 PSME3P61289 254 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 RHOAP61586 193 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TRIP4Q15650 581 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 NRF1Q16656 503 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 C6orf52Q5T4I8 152 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 PRSS55Q6UWB4 352 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 FAM126BQ8IXS8 530 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 MARVELD2Q8N4S9 558 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 UGT2B28Q9BY64 529 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 SEZ6LQ9BYH1 1024 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 MID1IP1Q9NPA3 183 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 LTB4R2Q9NPC1 389 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CMTM6Q9NX76 183 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 ELOVL2Q9NXB9 296 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 ATXN10Q9UBB4 475 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 MYRFQ9Y2G1 1151 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TRIM64CA6NLI5 447 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 IPO13O94829 963 aaKnown RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 FGF4P08620 206 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 MSH3P20585 1137 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 IMPDH1P20839 514 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 MAGEA11P43364 429 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CLCN7P51798 805 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 ST8SIA6P61647 398 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 RPS24P62847 133 aaKnown RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 CARTPTQ16568 116 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 SYTL3Q4VX76 610 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TBPL2Q6SJ96 375 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 AMIGO2Q86SJ2 522 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TBC1D19Q8N5T2 526 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 TMCO5AQ8N6Q1 288 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 CLSTN3Q9BQT9 956 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 RSPO3Q9BXY4 272 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 SEMA6AQ9H2E6 1030 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 AKTIPQ9H8T0 292 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 UTS2RQ9UKP6 389 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 CRYL1Q9Y2S2 319 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 VWA7Q9Y334 891 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 ARIH1Q9Y4X5 557 aaPredicted RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 GPR45Q9Y5Y3 372 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 OAS3Q9Y6K5 1087 aaKnown RBP9.08□□□□□ -0.96
RPA1-201ENST00000254719 PCM1Q15154 2024 aa9.08□□□□□ -0.96
RPA1-201ENST00000254719 UBXN8O00124 270 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 MT-CO1P00395 513 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 RPL17P18621 184 aaKnown RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 RPL5P46777 297 aaKnown RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 EPHB3P54753 998 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 CDH13P55290 713 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 PAGE3Q5JUK9 113 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 PGAM4Q8N0Y7 254 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 BTN2A3PQ96KV6 586 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 KCTD14Q9BQ13 255 aaPredicted RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 COMMD3-BMI1R4GMX3 469 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 INSIG1O15503 277 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 PENKP01210 267 aaPredicted RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 MRPL19P49406 292 aaKnown RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 DIO3P55073 304 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 ADARP55265 1226 aaKnown RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 NKG7Q16617 165 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 CUZD1Q86UP6 607 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 OR7D4Q8NG98 312 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 PHF21BQ96EK2 531 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 FUBP3Q96I24 572 aaKnown RBP eCLIP9.07□□□□□ -0.96
RPA1-201ENST00000254719 SPATA17Q96L03 361 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 NTN4Q9HB63 628 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 GKN1Q9NS71 199 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 RAD18Q9NS91 495 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 LEF1Q9UJU2 399 aaPredicted RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 PHF24Q9UPV7 400 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 TMEM229AB2RXF0 380 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 B3GALT4O96024 378 aa9.07□□□□□ -0.96
RPA1-201ENST00000254719 MRPS22P82650 360 aaKnown RBP9.07□□□□□ -0.96
RPA1-201ENST00000254719 HIST2H2ACQ16777 129 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms