RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ITGALP20701 1170 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 HOXD12P35452 270 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 ALDH6A1Q02252 535 aaKnown RBP11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 ENPEPQ07075 957 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 PIGFQ07326 219 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 ACAP2Q15057 778 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 SYTL3Q4VX76 610 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 SLC39A12Q504Y0 691 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 NEK5Q6P3R8 708 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 SPATA19Q7Z5L4 167 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 WDTC1Q8N5D0 677 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 PCYT2Q99447 389 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 EMILIN2Q9BXX0 1053 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 POLR1EQ9GZS1 481 aaKnown RBP11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 DPEP3Q9H4B8 488 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 INTS10Q9NVR2 710 aaKnown RBP11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 MKS1Q9NXB0 559 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 TNPO3Q9Y5L0 923 aaKnown RBP11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 AKAP11Q9UKA4 1901 aa11.42□□□□□ -0.58
DNMT3B-201ENST00000201963 ANKRD33BA6NCL7 494 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 AURKAO14965 403 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 AREL1O15033 823 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SLC22A1O15245 554 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SERPINA1P01009 418 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 OR4Q2P0C623 313 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TBX4P57082 545 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 LCP2Q13094 533 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SYT12Q8IV01 421 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 MIR1-1HGQ9H1L0 117 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TCAF1Q9Y4C2 921 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TP73O15350 636 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TULP3O75386 442 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 RAP2AP10114 183 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 POLD2P49005 469 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 ZNF177Q13360 481 aaPredicted RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 IL18R1Q13478 541 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 RAB6CQ53S08 254 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 GPR180Q86V85 440 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 EXOC2Q96KP1 924 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 HEPHQ9BQS7 1158 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 RAB6CQ9H0N0 254 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TMPRSS4Q9NRS4 437 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 TOR4AQ9NXH8 423 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 RPS6KA6Q9UK32 745 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 PRORSD1PA6NEY8 169 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 FAM220BPB1ANY3 271 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SOCS2O14508 198 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 SDHDO14521 159 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 RFXANKO14593 260 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 NBNO60934 754 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 UGT2B11O75310 529 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 PCSK6P29122 969 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 BMXP51813 675 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 FCHO2Q0JRZ9 810 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 PMS2P3Q13401 168 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 NPTX1Q15818 432 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 COL24A1Q17RW2 1714 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 LINGO1Q96FE5 620 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 FCRL2Q96LA5 508 aaPredicted RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 MAGEE1Q9HCI5 957 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 CDV3Q9UKY7 258 aaKnown RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 AP3M1Q9Y2T2 418 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 CEPT1Q9Y6K0 416 aa11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 MYO5AQ9Y4I1 1855 aaKnown RBP11.41□□□□□ -0.58
DNMT3B-201ENST00000201963 H0YC42 278 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 VILLO15195 856 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 TSPAN1O60635 241 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 ABCB7O75027 752 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 SEMA3DO95025 777 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 ENO2P09104 434 aaPredicted RBP11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 CD97P48960 835 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 NFATC3Q12968 1075 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 GPM6BQ13491 265 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 GALNT3Q14435 633 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 NAPRTQ6XQN6 538 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 DET1Q7L5Y6 550 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 PANX1Q96RD7 426 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 TDRD1Q9BXT4 1180 aaKnown RBP11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 DUSP16Q9BY84 665 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 PRRG3Q9BZD7 231 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 DCSTAMPQ9H295 470 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 SP140LQ9H930 580 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 ABCB9Q9NP78 766 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 ZNF624Q9P2J8 865 aaPredicted RBP11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 ERGIC3Q9Y282 383 aa11.4□□□□□ -0.58
DNMT3B-201ENST00000201963 COX7A2P14406 83 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms