RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CEP68Q76N32 757 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 SLC9A7Q96T83 725 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 OSBPL11Q9BXB4 747 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 PDP1Q9P0J1 537 aaPredicted RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 LIX1Q8N485 282 aa18.64■□□□□ 0.58
MBD3-201ENST00000156825 ZMIZ2Q8NF64 920 aa18.64■□□□□ 0.58
MBD3-201ENST00000156825 LRRC15Q8TF66 581 aa18.64■□□□□ 0.58
MBD3-201ENST00000156825 TP53INP1Q96A56 240 aa18.64■□□□□ 0.58
MBD3-201ENST00000156825 COQ6Q9Y2Z9 468 aa18.64■□□□□ 0.58
MBD3-201ENST00000156825 MAGP20916 626 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 NT5EP21589 574 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 NR4A1P22736 598 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 NCBP2-AS2Q69YL0 99 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 CRYBG2Q8N1P7 616 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 BANPQ8N9N5 519 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 SLC35B2Q8TB61 432 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 OSBPL7Q9BZF2 842 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 PNPLA3Q9NST1 481 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 ASNA1O43681 348 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 HOXD13P35453 343 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 IDH3AP50213 366 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 HADHBP55084 474 aaKnown RBP18.64■□□□□ 0.57
MBD3-201ENST00000156825 UBXN11Q5T124 520 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 SCAIQ8N9R8 606 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 OR10A6Q8NH74 314 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 PIH1D2Q8WWB5 315 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 ART5Q96L15 291 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 OR2AG1Q9H205 316 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 CMTM6Q9NX76 183 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 PER2O15055 1255 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 SLC34A3Q8N130 599 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 DEPDC4Q8N2C3 294 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 TLCD1Q96CP7 247 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 RAPGEFL1Q9UHV5 662 aa18.64■□□□□ 0.57
MBD3-201ENST00000156825 TPST2O60704 377 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 POU2F1P14859 743 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 MAPK12P53778 367 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 SMIM11AP58511 58 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 FAM171BQ6P995 826 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 PAQR3Q6TCH7 311 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 HID1Q8IV36 788 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 MYDGFQ969H8 173 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 CCDC177Q9NQR7 707 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 NUP62P37198 522 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 REP15Q6BDI9 236 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 MRPS26Q9BYN8 205 aaKnown RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 ZNF395Q9H8N7 513 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 IGSF9Q9P2J2 1179 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 LGALS13Q9UHV8 139 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 MRPS33Q9Y291 106 aaKnown RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 COL1A1P02452 1464 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 CCDC189A1A4V9 331 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 CCNA2P20248 432 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 PURAQ00577 322 aaKnown RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 RHAGQ02094 409 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 PPIGQ13427 754 aaKnown RBP eCLIP18.63■□□□□ 0.573e-9■■□□□ 12.7
MBD3-201ENST00000156825 PROSER1Q86XN7 944 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 AMER2Q8N7J2 671 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 ATP6V1C2Q8NEY4 427 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 CYB5D2Q8WUJ1 264 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.63■□□□□ 0.577e-7■■□□□ 11.5
MBD3-201ENST00000156825 CNTN6Q9UQ52 1028 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 TOP3AQ13472 1001 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 TBC1D21Q8IYX1 336 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 ZNF563Q8TA94 476 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 LCN9Q8WX39 176 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 NUDT4Q9NZJ9 180 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 BTBD3Q9Y2F9 522 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 PDE9AO76083 593 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 FADS2O95864 444 aaKnown RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 AAGABQ6PD74 315 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 CMASQ8NFW8 434 aaPredicted RBP18.63■□□□□ 0.57
MBD3-201ENST00000156825 FAM110BQ8TC76 370 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 DNASE1L2Q92874 299 aa18.63■□□□□ 0.57
MBD3-201ENST00000156825 ELOVL7A1L3X0 281 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 SLC7A4O43246 635 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 UGT2B17O75795 530 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 KRT33AO76009 404 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 GNRH1P01148 92 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 WDR4P57081 412 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 DCTN2Q13561 401 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 LPIN1Q14693 890 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 FAM98AQ8NCA5 519 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 OR2T34Q8NGX1 318 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 OR2T3Q8NH03 318 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 FAM192AQ9GZU8 254 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 CLK4Q9HAZ1 481 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 BBIP1A8MTZ0 92 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 SNPHO15079 494 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 HTR7P34969 479 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 ZDHHC20Q5W0Z9 365 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 KCT2Q8NC54 265 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 PLD4Q96BZ4 506 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 FUBP3Q96I24 572 aaKnown RBP eCLIP18.62■□□□□ 0.57
MBD3-201ENST00000156825 Q96MT0 163 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 DNAJC28Q9NX36 388 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 SLC2A6Q9UGQ3 507 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms