RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Lrrc8cQ8R502 803 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr695Q8VFM3 315 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Glra3Q91XP5 464 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pcdhga9Q91XX9 932 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pbld2Q9CXN7 288 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Mpp2Q9WV34 552 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Nfs1Q9Z1J3 459 aa9.81□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 R3hdmlA2A5I3 253 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gm382B1AXN3 1250 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gm4969D3YZT1 566 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Vmn2r22E9Q7S8 853 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Vmn2r5K7N788 911 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ap1g2O88512 791 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Atp1b2P14231 290 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 HalP35492 657 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tbx4P70325 552 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prss57Q14B24 284 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Chi3l1Q61362 389 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Kcna5Q61762 602 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Znf513Q6PD29 541 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Sema3dQ8BH34 777 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Svs2Q8BS30 375 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tmem150aQ91WN2 271 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Chst15Q91XQ5 561 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Dnaaf1Q9D2H9 634 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prorsd1Q9D820 169 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Dgat2Q9DCV3 388 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Med20Q9R0X0 212 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Vmn2r74E9PW21 853 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ncam2O35136 837 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Diaph2O70566 1098 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tbx1P70323 479 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Defb23Q30KP0 166 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Glp2rQ5IXF8 512 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Zdhhc20Q5Y5T1 380 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Znf728Q6P5C7 752 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr309Q7TS01 308 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prickle2Q80Y24 845 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ppp1r12bQ8BG95 976 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Npsr1Q8BZP8 371 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pabpc5Q8C7D3 381 aaKnown RBP9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Mthfd1Q922D8 935 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Atad3Q925I1 591 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam69bQ99ML4 431 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ndufaf1Q9CWX2 328 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Vmn2r73D3Z7M3 851 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Erich1E9PY43 332 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 ZfrO88532 1074 aaKnown RBP9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 H2-Eb1P04230 264 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Trim43bP86448 445 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 CtscP97821 462 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Naa11Q3UX61 218 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 RilpQ5ND29 369 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Elavl4Q61701 385 aaKnown RBP9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 XpaQ64267 272 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam3cQ91VU0 227 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gtpbp3Q923K4 492 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Grk2Q99MK8 689 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Q9CWU4 180 aaKnown RBP9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Lcn9Q9D267 178 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Snrnp48Q9D361 337 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 IqcdQ9D3V1 458 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pard6bQ9JK83 371 aa9.8□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 1700011I03RikE9PYL8 271 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Mkln1O89050 735 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Pdha2P35487 391 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Prdx1P35700 199 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rpl10lP86048 214 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Fam98aQ3TJZ6 515 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Apcdd1Q3U128 514 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 AbrQ5SSL4 859 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 TsnQ62348 228 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ca4Q64444 305 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Sort1Q6PHU5 825 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rpl10Q6ZWV3 214 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ckap2lQ7TS74 745 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cdh7Q8BM92 785 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Adprhl2Q8CG72 370 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Irak3Q8K4B2 609 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr525Q8VGL5 309 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Dnajc3Q91YW3 504 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 IkbipQ9DBZ1 373 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Top3bQ9Z321 862 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Krt6bQ9Z331 562 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr1188A2AV10 312 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 1700024B05RikE9Q6D7 167 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ptar1E9QAB6 424 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Angpt1O08538 498 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 EsrraO08580 422 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 LcatP16301 438 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Msh2P43247 935 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Arl1P61211 181 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Clec4fP70194 548 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 LcorlQ3U285 600 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Trafd1Q3UDK1 580 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tmeff1Q6PFE7 372 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rps27lQ6ZWY3 84 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Znf770Q8BIQ8 705 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tmem74Q8BQU7 305 aa9.79□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cfap20Q8BTU1 193 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms