RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Slc45a3Q8K0H7 553 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ints10Q8K2A7 710 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ebf4Q8K4J2 599 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Atg10Q8R1P4 215 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Barhl2Q8VIB5 384 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 NpntQ91V88 561 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Capn8Q91VA3 703 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fbxo32Q9CPU7 355 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 CatsperzQ9CQP8 194 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hm13Q9D8V0 378 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Plod2Q9R0B9 737 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Arrdc4A0A0B4J1F4 415 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nsmce4aG3XA30 381 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Aif1O70200 147 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Btnl2O70355 454 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 P04213 122 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 JunP05627 334 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Enpp1P06802 906 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 SpnP15702 395 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Etv4P28322 485 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gabrr2P56476 465 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Serpinb5P70124 375 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pitx1P70314 315 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 PhexP70669 749 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Grin2cQ01098 1239 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Kansl1lQ5DTI6 991 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Adora2bQ60614 332 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Itga2Q62469 1178 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 RadilQ69Z89 1099 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 4932411N23RikQ8C0S0 470 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nrn1lQ8C4W3 162 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fam221bQ8C627 487 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Piwil2Q8CDG1 971 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 BicralQ8CHH5 1074 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 ManbaQ8K2I4 879 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lurap1lQ8K2P1 221 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 RhoqQ8R527 205 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 MpstQ99J99 297 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 SqorQ9R112 450 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mrpl40Q9Z2Q5 206 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Krt6bQ9Z331 562 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1480A0A140LIR8 359 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr566A0A1B0GST0 319 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 1700001O22RikA2APZ1 375 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pabpc4lG5E8X2 370 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rps17P63276 135 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Galnt3P70419 633 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nfatc3P97305 1075 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ddx51Q6P9R1 639 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Kmt5cQ6Q783 468 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Prickle2Q80Y24 845 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 TufmQ8BFR5 452 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pgs1Q8BHF7 553 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ppp1r1cQ8BKK4 108 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 GmppbQ8BTZ7 360 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pitrm1Q8K411 1036 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Treml1Q8K558 317 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 EedQ921E6 441 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zdhhc13Q9CWU2 622 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gbe1Q9D6Y9 702 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr703Q9EPF5 319 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 ScelQ9EQG3 652 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Scube2Q9JJS0 997 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pin1Q9QUR7 165 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Smok4aA0JLX3 433 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fkbp7O54998 218 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 ApoeP08226 311 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ifrd1P19182 449 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 RxraP28700 467 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mdga1Q0PMG2 940 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr616Q3KPB0 317 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 SbplQ3TUY3 232 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Serac1Q3U213 654 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 B020004J07RikQ3UTC0 476 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zbtb2Q3V3W4 514 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Arhgef38Q80VK6 770 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 AW551984Q8BGF0 804 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Smoc1Q8BLY1 463 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Amz1Q8BVF9 502 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 GancQ8BVW0 898 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 N4bp2l2Q8JZS6 575 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Taf10Q8K0H5 218 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Vmn1r198Q8R263 300 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc35c2Q8VCX2 364 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr847Q8VFF4 312 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1494Q8VGP8 315 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Atp6v1c2Q99L60 427 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ska2Q9CR46 120 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rfc5Q9D0F6 339 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cnbd2Q9D5U8 673 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hapln2Q9ESM3 341 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Sept5Q9Z2Q6 369 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 DnpepQ9Z2W0 473 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gbp11A9YVJ5 442 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc28a1E9PXX9 648 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pbx3O35317 434 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 JunbP09450 344 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Apex1P28352 317 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Abraxas2Q3TCJ1 415 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Echdc2Q3TLP5 296 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms