RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tpst2O88856 376 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ttf1Q62187 859 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmprss4Q8VCA5 435 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cd300ldQ8VCH2 221 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rin1Q921Q7 763 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lhfpl3Q9CTN8 222 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 XkQ9QXY7 446 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc6a6O35316 621 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 DsppP97399 934 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 BollQ924M5 281 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 9330159F19RikD3Z623 648 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kctd18E0CZ26 429 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pfdn2O70591 154 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kcnj12P52187 427 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rasgef1bQ8JZL7 473 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Camkk1Q8VBY2 505 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrp8Q924X6 996 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 NenfQ9CQ45 171 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmbim4Q9DA39 238 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CtsmQ9JL96 333 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lypla2Q9WTL7 231 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 0610012G03RikA0A0J9YTR2 95 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Plk2P53351 682 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 UqcrhP99028 89 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gdpgp1Q3TLS3 386 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gpr149Q3UVY1 732 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Atp6v1c2Q99L60 427 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Nfat5Q9WV30 1534 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mvb12bQ6KAU4 317 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 BpifcQ8C186 509 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rell1Q8K2J7 272 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Clp1Q99LI9 425 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Urb1Q571H0 2274 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm3159K7N760 267 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Vmn2r42O35192 852 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ap2a1P17426 977 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 UoxP25688 303 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ano7Q14AT5 859 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr681Q3SXH8 315 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 BtrcQ3ULA2 605 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Grid2Q61625 1007 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Prkd1Q62101 918 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sdr16c5Q7TQA3 309 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 FicdQ8BIX9 458 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam25cQ8CF02 89 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr679Q8VGV0 315 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Krtap5-3Q9D226 196 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cib1Q9Z0F4 191 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrrc73B2RWC4 316 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Btbd1P58544 488 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm8773Q3UQ24 132 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc6a4Q60857 630 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rap2aQ80ZJ1 183 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Atg12Q9CQY1 141 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Prps2Q9CS42 318 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kctd4Q9D7X1 259 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Natd1Q9DBW3 110 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Smim10l2aA0A0B4J1F8 78 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rasgef1aA0A0N4SVR5 498 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 DldO08749 509 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Camk2bP28652 542 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 MazP56671 477 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 UtyP79457 1212 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sema4bQ62179 823 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr26Q7TRB7 308 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmem220Q8BP07 167 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr784Q8VFZ9 319 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 EurlQ9D7G4 290 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr933Q9EQA0 308 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr172E9Q8F6 309 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cdh5P55284 784 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mc4rP56450 332 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 March4Q80TE3 409 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Polr1eQ8K202 482 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sumf1Q8R0F3 372 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Akr1d1Q8VCX1 325 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Prss40A6H6T1 365 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mybpc1D3YU50 1127 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm4302E9PX25 294 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ezh1P70351 747 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CblbQ3TTA7 982 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pp2d1Q8BVT6 620 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ago3Q8CJF9 860 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cnot6Q8K3P5 557 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Txndc5Q91W90 417 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tpgs1Q99MS8 303 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Anks3Q9CZK6 655 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zfc3h1B2RT41 1992 aaKnown RBP16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam131cA2ADB2 273 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Vmn2r14E9Q759 848 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Prom1O54990 867 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Csf2P01587 141 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Agxt2Q3UEG6 513 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr1062Q7TR71 315 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Znf423Q80TS5 1292 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fstl5Q8BFR2 847 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ahsa1Q8BK64 338 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Uroc1Q8VC12 676 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mrgpra1Q91WW5 304 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Otud3B1AZ99 396 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms