RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Socs7Q8VHQ2 579 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fig4Q91WF7 907 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Snx29Q9D3S3 818 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hapln2Q9ESM3 341 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rad18Q9QXK2 509 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Katna1Q9WV86 491 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc22a4Q9Z306 553 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Znf106O88466 1888 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cyp2c69E9PXC3 491 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Prf1P10820 554 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc19a1P41438 512 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cyp2c40P56657 491 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Nploc4P60670 608 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lsm3P62311 102 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Itih2Q61703 946 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Q6P2K3 674 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ckmt2Q6P8J7 419 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dna2Q6ZQJ5 1062 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tas2r106Q7M724 308 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr1198Q7TR12 308 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Wipi2Q80W47 445 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vrk2Q8BN21 503 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Kyat1Q8BTY1 424 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmem62Q8BXJ9 643 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Nprl3Q8VIJ8 569 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Diras1Q91Z61 198 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Aco2Q99KI0 780 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cntd1Q9D995 334 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm45713A0A1B0GS68 446 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Phf11bB4XVQ1 276 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 B020004C17RikJ3QP07 232 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm14496K7N5U4 849 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vmn2r53L7N473 806 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 TpmtO55060 240 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 NagluO88325 739 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hoxa9P09631 271 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc2a4P14142 509 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pxmp2P42925 194 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc11a2P49282 568 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rps17P63276 135 aaKnown RBP13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hrh1P70174 488 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 PamP97467 979 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 InhbbQ04999 411 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dnal1Q05A62 190 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cfap52Q5F201 620 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slain1Q68FF7 579 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Klhl42Q8BFQ9 493 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pgs1Q8BHF7 553 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Adgrg3Q8R0T6 542 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr352Q8VGJ9 315 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Atp6v1c2Q99L60 427 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dhrs7Q9CXR1 338 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Elp3Q9CZX0 547 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Snap29Q9ERB0 260 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dnajb9Q9QYI6 222 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Psma4Q9R1P0 261 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cdc42ep5Q9Z0X0 150 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm45861A0A1B0GRY3 1923 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm21964A0A1W2P7S4 437 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vmn2r90E9PXJ8 863 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 BhmtO35490 407 aaKnown RBP13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 St3gal5O88829 414 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cd9P40240 226 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Galnt3P70419 633 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ccbe1Q3MI99 408 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Colec11Q3SXB8 272 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Shcbp1lQ3TTP0 639 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rnf215Q5SPX3 379 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mapk10Q61831 464 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 HjurpQ6PG16 667 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dsg4Q7TMD7 1041 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Chst2Q80WV3 530 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Epb41l5Q8BGS1 731 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ikzf5Q8BU00 419 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dcaf12l1Q8CBW4 501 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc35b4Q8CIA5 331 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Txndc11Q8K2W3 948 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr273Q8VG87 317 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr532Q8VGT4 309 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 SelenomQ8VHC3 145 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Marc2Q922Q1 338 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mrps2Q924T2 291 aaKnown RBP13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rgs18Q99PG4 235 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cmc1Q9CPZ8 106 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Nudt17Q9CWD3 296 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Trmt11Q9CWH5 460 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Smim23Q9DAL0 136 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olig2Q9EQW6 323 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Wfdc1Q9ESH5 211 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fads3Q9JJE7 449 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Trpc5Q9QX29 975 aa13.28□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp563B8JJZ9 448 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn2r50E9PW61 861 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm7073E9QAS1 335 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trim15G3UY57 292 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Akap3O88987 864 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 P04213 122 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tuba3aP05214 450 aaKnown RBP13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Oas1aP11928 367 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gria1P23818 907 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms