RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Dusp6Q9DBB1 381 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Jph2Q9ET78 696 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Galk1Q9R0N0 392 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gbp11A9YVJ5 442 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Zfp938E9Q9G3 579 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 LdhcP00342 332 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 SpnP15702 395 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pfdn6Q03958 127 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 A1bgQ19LI2 512 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fam117bQ3U3E2 584 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 MlipQ5FW52 269 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Il1rapQ61730 570 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 MogQ61885 246 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pcbp2Q61990 362 aaKnown RBP12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Txndc15Q6P6J9 344 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Acad9Q8JZN5 625 aaKnown RBP12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rab15Q8K386 212 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kdelr3Q8R1L4 214 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 OptcQ920A0 328 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Mrpl1Q99N96 336 aaKnown RBP12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cyp4f14Q9EP75 524 aa12.56□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fam131cA2ADB2 273 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 ZfrO88532 1074 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 BdnfP21237 249 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Vps26aP40336 327 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Dlx2P40764 332 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Alg6Q3TAE8 507 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nt5c3bQ3UFY7 300 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Lsg1Q3UM18 644 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Zfp560Q3URI6 754 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Axdnd1Q3UZ57 424 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Znrf3Q5SSZ7 913 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rbbp7Q60973 425 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gpr141Q7TQP0 305 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Phf24Q80TL4 400 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 C2cd4bQ80XU5 340 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Trmt2bQ8BQJ6 493 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Clic5Q8BXK9 251 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Taco1Q8K0Z7 294 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kctd11Q8K485 232 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nudt4Q8R2U6 179 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 HnrnprQ8VHM5 632 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pcdh18Q8VHR0 1134 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CatsperzQ9CQP8 194 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ly6kQ9CWP4 154 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CenpkQ9ESN5 271 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Aqp5Q9WTY4 265 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Dio2Q9Z1Y9 266 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cep350E9Q309 3095 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Col4a6B1AVK5 1691 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ralgps1A2AR50 585 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Vmn1r176G3UW31 304 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Anxa6P14824 673 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Hspa4lP48722 838 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CartptP56388 129 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Adamts8P57110 905 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 F8a1Q00558 380 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Slc13a5Q67BT3 572 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sgo2Q7TSY8 1164 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gxylt2Q810K9 444 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tspan12Q8BKT6 305 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gpc2Q8BKV1 579 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gbp9Q8BTS3 619 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 IlkapQ8R0F6 392 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Zfp940Q8R2Q3 566 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tmem161aQ8VCA6 480 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 PxnQ8VI36 591 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nck1Q99M51 377 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fcf1Q9CTH6 198 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Q9D5Y0 588 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 FancgQ9EQR6 623 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Slc7a9Q9QXA6 487 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kcne5Q9QZ26 143 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gsk3bQ9WV60 420 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gbp6A0A0G2JDV3 611 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Igkv12-98A0A0G2JGF9 115 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ccdc120A2AEV7 629 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Lgr4A2ARI4 951 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gbp4A4UUI3 631 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Polr2jO08740 117 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cdc6O89033 562 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Lzts1P60853 599 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gdf3Q07104 366 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rnf180Q3U827 592 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gm5800Q497L3 186 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 BegainQ68EF6 600 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 ShbQ6PD21 503 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Letm2Q7TNU7 480 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Thoc5Q8BKT7 683 aaKnown RBP12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ccdc32Q8BS39 179 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 FgbQ8K0E8 481 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Snx2Q9CWK8 519 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 PacrglQ9D3X5 248 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 MsraQ9D6Y7 233 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Glod5Q9D8I3 148 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 MajinQ9D992 256 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Hapln2Q9ESM3 341 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pin1Q9QUR7 165 aa12.55□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Igkv12-46A0A140T8P6 115 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 KlO35082 1014 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms