RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Hp1bp3Q3TEA8 554 aaKnown RBP4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Fam198bQ3UPI1 517 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lipo3Q3UT41 399 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ifngr2Q63953 332 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr670Q7TRP3 312 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Psd4Q8BLR5 1005 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cdc16Q8R349 620 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Unc93b1Q8VCW4 598 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Setd7Q8VHL1 366 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Asb15Q8VHS6 583 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zfp617Q91WM0 559 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Syt12Q920N7 421 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Q9CPS8 106 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Metap1dQ9CPW9 335 aa4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cyb5bQ9CQX2 146 aaKnown RBP4.53□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Megf6Q80V70 1572 aa4.53□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Mageb4A2A9R3 556 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Prrg1A2BFE8 218 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Vmn2r72D3Z4N8 856 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ptrhd1D3Z4S3 140 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Srp54bE9PXC0 504 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Spata31E9QAF0 1014 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rgs7O54829 469 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Itm2bO89051 266 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Srp54P14576 504 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Myf6P15375 242 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Muc3aQ3U5A2 218 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fam46cQ5SSF7 391 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Klhl42Q8BFQ9 493 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gpr150Q8BL07 427 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cers6Q8C172 384 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tmem252Q8C353 183 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Mkl1Q8K4J6 964 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Mcfd2Q8K5B2 145 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr1484Q8VEU6 315 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr586Q8VH13 317 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cavin3Q91VJ2 260 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Elovl6Q920L5 267 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Kat2aQ9JHD2 830 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gpc1Q9QZF2 557 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nhsl1Q8CAF4 1587 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm5796E9Q7M8 205 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm3629K7N6Y2 205 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm10340K7N708 205 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Prom1O54990 867 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pknox1O70477 436 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Arl6O88848 186 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 GhrP16882 650 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gna12P27600 379 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ccnb2P30276 398 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 WarsP32921 481 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Aff3P51827 1254 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ampd1Q3V1D3 745 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fam149b1Q6NSV7 578 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fam126aQ6P9N1 521 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pcp4l1Q6W8Q3 68 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rcn3Q8BH97 328 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fbxo21Q8VDH1 627 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 L2hgdhQ91YP0 464 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fbxo32Q9CPU7 355 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tma16Q9CR02 221 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Vps35Q9EQH3 796 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Jph1Q9ET80 660 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 PpigA2AR02 752 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Capn1O35350 713 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cd2P08920 344 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cyp2b10P12791 500 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rps17P63276 135 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 ChatQ03059 641 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gdpd4Q3TT99 632 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ndst1Q3UHN9 882 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Oog2Q7TPX8 476 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Sult1c1Q80VR3 304 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cox15Q8BJ03 413 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Bend5Q8C6D4 421 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tsen15Q8R3W5 168 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Wdr64Q9D565 1086 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ovca2Q9D7E3 225 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Q9DAD0 168 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ca5bQ9QZA0 317 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tll2Q9WVM6 1012 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ttc6G3UYY4 1857 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Eif2b3B1AUN2 452 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm8444F6XS56 118 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dnajb6O54946 365 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 LatO54957 242 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tulp3O88413 460 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Traf2P39429 501 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rab4aP56371 218 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 St14P56677 855 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 GaaP70699 953 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 9130409I23RikQ3TS87 320 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Angptl1Q640P2 490 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Zpbp2Q6X786 326 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Kcnt1Q6ZPR4 1224 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dnajb13Q80Y75 316 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 AardQ811W1 167 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Creb3l2Q8BH52 521 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Hspbap1Q8BK58 483 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr1302Q8VGE9 315 aa4.52□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms