RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rnf169E9Q7F2 694 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Il13ra1O09030 424 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Plin4O88492 1403 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Matn4O89029 624 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Hoxa9P09631 271 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Psmb9P28076 219 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Aldh2P47738 519 aaKnown RBP18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Flt3lgP49772 232 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Tanc1Q0VGY8 1856 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Krt2Q3TTY5 707 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Foxk2Q3UCQ1 651 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Glb1l2Q3UPY5 636 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 SyncripQ7TMK9 623 aaKnown RBP18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cnpy4Q8BQ47 245 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Vps50Q8CI71 964 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Vmn1r203Q8R273 311 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cdhr5Q8VHF2 831 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 PxnQ8VI36 591 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 CatsperzQ9CQP8 194 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Art4Q9CRA0 300 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 PyglQ9ET01 850 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rai2Q9QVY8 529 aa18.53■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Col24a1Q30D77 1733 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Slc28a1E9PXX9 648 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 2610008E11RikG3X964 669 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 NapsaO09043 419 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 RxrgP28705 463 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Abcb7Q61102 752 aaKnown RBP18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Txndc15Q6P6J9 344 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 RimklaQ6PFX8 380 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Amigo1Q80ZD8 492 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Q810N5 247 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Insig1Q8BGI3 259 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Ppp1r3eQ8BRJ4 279 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Fastkd3Q8BSN9 661 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Trib2Q8K4K3 343 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Hid1Q8R1F6 788 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Akirin1Q99LF1 191 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Cmtm6Q9CZ69 183 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 S100a14Q9D2Q8 104 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Phf10Q9D8M7 497 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Rab13Q9DD03 202 aa18.52■□□□□ 0.56
Shkbp1-201ENSMUST00000003857 Zfp626A0A0U1RQ84 676 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rhox3cA2AWM0 215 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rhox3hL7MU37 215 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Serpina3kP07759 418 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Clec2lP0C7M9 211 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Arpp19P56212 112 aaKnown RBP18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Slc26a1P58735 704 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cpne9Q1RLL3 553 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gm4951Q3UED7 406 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Pdap1Q3UHX2 181 aaKnown RBP18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Rhox3aQ4TU90 215 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Spata48Q5NC83 441 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cyp2c54Q6XVG2 490 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Arhgap12Q8C0D4 838 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 BicralQ8CHH5 1074 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ifi44lQ9BDB7 447 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Snap29Q9ERB0 260 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Tmem8aQ9ESN3 769 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 CpqQ9WVJ3 470 aa18.52■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Vmn2r73D3Z7M3 851 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Vmn2r38G3UYA8 861 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Obox5G3X9P6 291 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Vmn2r33K7N705 861 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Prkag1O54950 330 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Sh3pxd2aO89032 1124 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Phkg1P07934 388 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Etv4P28322 485 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Pxmp2P42925 194 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Wbp2P97765 261 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Znrf3Q5SSZ7 913 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Nfe2l2Q60795 597 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Kif18bQ6PFD6 834 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Olfr412Q7TRW7 312 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Abi3Q8BYZ1 367 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Strip2Q8C9H6 844 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Syn3Q8JZP2 579 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Kdelr3Q8R1L4 214 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 WwoxQ91WL8 414 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Cd209eQ91ZW7 208 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Moxd1Q9CXI3 613 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Alg14Q9D081 217 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gbe1Q9D6Y9 702 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Hapln2Q9ESM3 341 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Gipc1Q9Z0G0 333 aa18.51■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Olfr675A0A1B0GSE1 317 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Aff2O55112 1272 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Il11ra2P70225 432 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ceacam5Q3UKK2 947 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 B020004J07RikQ3UTC0 476 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Nr2c1Q505F1 590 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Zfp78Q5U406 512 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Jak3Q62137 1100 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Arhgap30Q640N3 1101 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Klhl5Q6PFE1 708 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Lrp10Q7TQH7 713 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Ces2aQ8QZR3 558 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 Stk32cQ8QZV4 488 aa18.5■□□□□ 0.55
Shkbp1-201ENSMUST00000003857 TmlheQ91ZE0 421 aa18.5■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms