RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Pxmp2P42925 194 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gsdmc2Q2KHK6 480 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ddx4Q61496 702 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Zzz3Q6KAQ7 910 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vtcn1Q7TSP5 283 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Prickle2Q80Y24 845 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ubp1Q811S7 540 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 PigwQ8C398 503 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pdcd2lQ8C5N5 364 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gsdmc3Q8CB12 480 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Smoc2Q8CD91 447 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Barhl2Q8VIB5 384 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dppa5aQ9CQS7 118 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mgrn1Q9D074 532 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mmp19Q9JHI0 527 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nme4Q9WV84 186 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Frmpd3A0A140LIW3 1774 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sirpb1aA0A0A6YYP6 397 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rad21l1A2AU37 552 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Xpnpep3B7ZMP1 506 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ifrd1P19182 449 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gna12P27600 379 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 ThrbP37242 461 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ndst2P52850 883 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ebf1Q07802 591 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Clec12aQ504P2 267 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 PkdccQ5RJI4 492 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 HadhQ61425 314 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 ScapQ6GQT6 1276 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Znf280cQ6P3Y5 742 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Svs1Q6WIZ7 820 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rmnd5aQ80YQ8 391 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Them6Q80ZW2 207 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Efr3aQ8BG67 819 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mrps35Q8BJZ4 320 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Utp6Q8VCY6 597 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sh3d19Q91X43 789 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc5a2Q923I7 670 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sdcbp2Q99JZ0 292 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fars2Q99M01 451 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Trim33Q99PP7 1142 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rpl17Q9CPR4 184 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mzt2Q9CQ25 159 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Hspa12bQ9CZJ2 685 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 ArskQ9D2L1 553 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mfsd10Q9D2V8 456 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc25a13Q9QXX4 676 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Stau1Q9Z108 487 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mad2l1Q9Z1B5 205 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ttc23lA6H6E9 458 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Eif2b3B1AUN2 452 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nlrp12E9Q5R7 1054 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Zfp938E9Q9G3 579 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 DdcO88533 480 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rab8aP55258 207 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cab39Q06138 341 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Echdc2Q3TLP5 296 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Hbq1bQ3U0A6 142 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cd300aQ6SJQ0 318 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rxfp4Q7TQP4 414 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 IfneQ80ZF2 192 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mbtps2Q8CHX6 515 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Lsm14aQ8K2F8 462 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Treml1Q8K558 317 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc29a4Q8R139 528 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn1r205Q8R276 316 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cyp4f3Q99N16 524 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 PgcQ9D7R7 392 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Isca2Q9DCB8 154 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 NinQ61043 2035 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ttc6G3UYY4 1857 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ism2D3Z6A3 493 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Zfp882E9Q4R4 555 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn2r38G3UYA8 861 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Spdye4cI6XKQ3 339 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn2r33K7N705 861 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Asna1O54984 348 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 TgfbiP82198 683 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 AnpepP97449 966 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Stard3Q61542 446 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Phlda1Q62392 405 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tnpo3Q6P2B1 923 aaKnown RBP9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ofcc1Q8BGX4 166 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Scn3bQ8BHK2 215 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 ScaiQ8C8N2 606 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Hmgcll1Q8JZS7 343 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Atg10Q8R1P4 215 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Zdhhc7Q91WU6 308 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pcdha8Q91Y12 946 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Chid1Q922Q9 393 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cryl1Q99KP3 319 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Spock2Q9ER58 423 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Epm2aQ9WUA5 330 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 DnpepQ9Z2W0 473 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm45713A0A1B0GS68 446 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 TpmtO55060 240 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 NagluO88325 739 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vti1bO88384 232 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tpst2O88856 376 aa9.37□□□□□ -0.91
Col6a1-201ENSMUST00000001147 WarsP32921 481 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms