RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ITPKAP23677 461 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 GPS2Q13227 327 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PDAP1Q13442 181 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 ZNF460Q14592 562 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PMS2CLQ68D20 193 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PIM3Q86V86 326 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 SRRM1Q8IYB3 904 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 NELL1Q92832 810 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 ARL8AQ96BM9 186 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 TSPAN17Q96FV3 270 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 KLHDC7BQ96G42 594 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PANX3Q96QZ0 392 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 ZNHIT2Q9UHR6 403 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PRKAB1Q9Y478 270 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 THADAQ6YHU6 1953 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 QSOX1O00391 747 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 TOR1BO14657 336 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PHGDHO43175 533 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 ALDOAP04075 364 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 CD38P28907 300 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PBLDP30039 288 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 RAB10P61026 200 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PLK5Q496M5 336 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 LAYNQ6UX15 382 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 PRR23BQ6ZRT6 265 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 CEP97Q8IW35 865 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 CNPY4Q8N129 248 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 OR56A4Q8NGH8 313 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 LKAAEAR1Q8TD35 194 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 MZB1Q8WU39 189 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 DNASE2BQ8WZ79 361 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 KCNJ9Q92806 393 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 WDR92Q96MX6 357 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 GPR21Q99679 349 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 TM9SF3Q9HD45 589 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 MRPL40Q9NQ50 206 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 FAM8A1Q9UBU6 413 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 NOVA2Q9UNW9 492 aaKnown RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 WDFY4Q6ZS81 3184 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 ATXN2Q99700 1313 aaKnown RBP17.22■□□□□ 0.35
PHGDH-230ENST00000641927 SGTAO43765 313 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 NUAK1O60285 661 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 FTH1P02794 183 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 CEACAM5P06731 702 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 FDXRP22570 491 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PRLHRP49683 370 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 DNAJC3Q13217 504 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 SIM2Q14190 667 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PTK2BQ14289 1009 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PLA2G4EQ3MJ16 856 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PPM1JQ5JR12 505 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 TPRG1LQ5T0D9 272 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 OTOAQ7RTW8 1153 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 RD3Q7Z3Z2 195 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 TRABD2AQ86V40 505 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 MFSD2AQ8NA29 543 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 SIDT2Q8NBJ9 832 aaKnown RBP17.22■□□□□ 0.35
PHGDH-230ENST00000641927 ZBTB44Q8NCP5 570 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 FAM174AQ8TBP5 190 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 ZNF514Q96K75 400 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-230ENST00000641927 VPS11Q9H270 941 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PCMTD2Q9NV79 361 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 GALPQ9UBC7 116 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 TRMT6Q9UJA5 497 aaKnown RBP17.22■□□□□ 0.35
PHGDH-230ENST00000641927 TLK1Q9UKI8 766 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 SLC17A4Q9Y2C5 497 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 PCDHGA2Q9Y5H1 932 aa17.22■□□□□ 0.35
PHGDH-230ENST00000641927 GPR89AB7ZAQ6 455 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 BCAT2O15382 392 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-230ENST00000641927 GRID2O43424 1007 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 RFPL1O75677 317 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 GPR89BP0CG08 455 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 PYGBP11216 843 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 KRT4P19013 534 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 CRABP2P29373 138 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 TAF1BQ53T94 588 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-230ENST00000641927 UGT3A1Q6NUS8 523 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 NAPRTQ6XQN6 538 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 TIFABQ6ZNK6 161 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 LRRTM4Q86VH4 590 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 GALNT13Q8IUC8 556 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 SPNS2Q8IVW8 549 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 C4orf33Q8N1A6 199 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 SLC22A18ASQ8N1D0 253 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 ELMO1Q92556 727 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 ATP6V1G3Q96LB4 118 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 CCM2Q9BSQ5 444 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 GPAMQ9HCL2 828 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 CYP4F12Q9HCS2 524 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 FGF22Q9HCT0 170 aa17.21■□□□□ 0.35
PHGDH-230ENST00000641927 SPATS2LQ9NUQ6 558 aaKnown RBP17.21■□□□□ 0.35
PHGDH-230ENST00000641927 KLQ9UEF7 1012 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms