RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TMEM35BQ8NCS4 154 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.73
SCN3A-209ENST00000639244 RSAD1Q9HA92 442 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 SACM1LQ9NTJ5 587 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 THG1LQ9NWX6 298 aaKnown RBP4.28□□□□□ -1.73
SCN3A-209ENST00000639244 FAM198AQ9UFP1 575 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 CLCA2Q9UQC9 943 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 KIAA0232Q92628 1395 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SF3B1O75533 1304 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GSTA4O15217 222 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KRT33AO76009 404 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PSMG1O95456 288 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 UQCRC1P31930 480 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MAP4K2Q12851 820 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SCGB2A2Q13296 93 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 FAXCQ5TGI0 409 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SEL1L3Q68CR1 1132 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CREB3L2Q70SY1 520 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DDX53Q86TM3 631 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CNBD2Q96M20 576 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TMEM74Q96NL1 305 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NEU1Q99519 415 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C19orf44Q9H6X5 657 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MGAT4CQ9UBM8 478 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NKX1-2Q9UD57 310 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 INO80Q9ULG1 1556 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ATXN7L1Q9ULK2 861 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ECM29Q5VYK3 1845 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SALL3Q9BXA9 1300 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MTMR11A4FU01 709 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DRGXA6NNA5 263 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DPM1O60762 260 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ENTPD5O75356 428 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CCNE2O96020 404 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 RARAP10276 462 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MMP8P22894 467 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GRIA2P42262 883 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NOTUMQ6P988 496 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 STK40Q8N2I9 435 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C12orf45Q8N5I9 185 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 OR6J1Q8NGC5 347 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TMEM40Q8WWA1 233 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 LRIG1Q96JA1 1093 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GSX1Q9H4S2 264 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 VAT1LQ9HCJ6 419 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ABCB9Q9NP78 766 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KDM5BQ9UGL1 1544 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NSD3Q9BZ95 1437 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 A8MV72 311 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TRIM24O15164 1050 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KCNK5O95279 499 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 IL18Q14116 193 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CBX2Q14781 532 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 LRIF1Q5T3J3 769 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 FBXO46Q6PJ61 603 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AHI1Q8N157 1196 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AGBL5Q8NDL9 886 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 Q8NFD4 153 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ADIPOR1Q96A54 375 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AIDAQ96BJ3 306 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TOX2Q96NM4 488 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DHRS4Q9BTZ2 278 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ZC3H12CQ9C0D7 883 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DERL2Q9GZP9 239 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 EIF4G3O43432 1585 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DOCK11Q5JSL3 2073 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KRBOX1C9JBD0 128 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PHYHO14832 338 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 LTKP29376 864 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PKNOX1P55347 436 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GALK2Q01415 458 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KLHL22Q53GT1 634 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 REM2Q8IYK8 340 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 FAM13CQ8NE31 585 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TSPAN14Q8NG11 270 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PIMREGQ9BSJ6 248 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 VCX2Q9H322 139 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TNNQ9UQP3 1299 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ABCA7Q8IZY2 2146 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SCN3AQ9NY46 2000 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 A0A0A6YYK5 440 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L5A8MUK1 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KPNA3O00505 521 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 LDLRAD4O15165 306 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ZFPL1O95159 310 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 IFNA6P05013 189 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 RNF224P0DH78 156 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CSH1P0DML2 217 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CSH2P0DML3 217 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DRD4P21917 467 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CORO1AP31146 461 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ERVK-25P63136 954 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 BNIP2Q12982 314 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NADK2Q4G0N4 442 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms