RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ZBTB2Q8N680 514 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 POP5Q969H6 163 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ZNF778Q96MU6 729 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 KCTD5Q9NXV2 234 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 GTF2IRD1Q9UHL9 959 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 RAB23Q9ULC3 237 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 MAPRE3Q9UPY8 281 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ERGIC3Q9Y282 383 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 MYH1P12882 1939 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 TOR1BO14657 336 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 SCELO95171 688 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 DHRS4L1P0CG22 281 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ITGA2P17301 1181 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 SLC6A2P23975 617 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 PPP1R3AQ16821 1122 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ZNF57Q68EA5 555 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 MSANTD2Q6P1R3 559 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 FBXL19Q6PCT2 694 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 SERPINA9Q86WD7 417 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 HTRA1Q92743 480 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 FEM1CQ96JP0 617 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 CD320Q9NPF0 282 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 VPS4AQ9UN37 437 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 A0A1B0GVM2 712 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 TCAF2A6NFQ2 919 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 UGT2B11O75310 529 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ECI2O75521 394 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 RAP2AP10114 183 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 PAICSP22234 425 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 SEPHS1P49903 392 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 RABL3Q5HYI8 236 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 CPTPQ5TA50 214 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 ERI1Q8IV48 349 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 PGBD3Q8N328 593 aa16.47■□□□□ 0.23
SCARB2-210ENST00000638567 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 INTS10Q9NVR2 710 aaKnown RBP16.47■□□□□ 0.23
SCARB2-210ENST00000638567 FAM234BA2RU67 622 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 CXCR6O00574 342 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 DUSP11O75319 330 aaKnown RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 PTGER3P43115 390 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 CEACAM7Q14002 265 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ZFAND2BQ8WV99 257 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 HPS1Q92902 700 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 NSMCE3Q96MG7 304 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ACAT2Q9BWD1 397 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 YIPF2Q9BWQ6 316 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 GCAP28676 217 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 GGT5P36269 586 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ATAD3BQ5T9A4 648 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ATG14Q6ZNE5 492 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ADGRG6Q86SQ4 1221 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 TRPV3Q8NET8 790 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 AARSD1Q9BTE6 412 aaKnown RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 IFT80Q9P2H3 777 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 SATB2Q9UPW6 733 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 ANGPT4Q9Y264 503 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 HS3ST4Q9Y661 456 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 OR10H3O60404 316 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 SNNO75324 88 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 BEST1O76090 585 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 CLIC3O95833 236 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-210ENST00000638567 DGKQP52824 942 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 FBXW4P57775 412 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 IKBKEQ14164 716 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 PPP4R4Q6NUP7 873 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 TRIM40Q6P9F5 258 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 MTSS1LQ765P7 747 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 TRIM48Q8IWZ4 208 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 PIK3C3Q8NEB9 887 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 TOP1MTQ969P6 601 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 CIDEBQ9UHD4 219 aa16.46■□□□□ 0.23
SCARB2-210ENST00000638567 FZD9O00144 591 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 PIRO00625 290 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 UGT2B4P06133 528 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 IL12AP29459 219 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 CTSKP43235 329 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 CDH4P55283 916 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.22
SCARB2-210ENST00000638567 HMGCS1Q01581 520 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 CARTPTQ16568 116 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 TMEM135Q86UB9 458 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 KCNA7Q96RP8 456 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 TMEM209Q96SK2 561 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 POLR3BQ9NW08 1133 aaPredicted RBP16.46■□□□□ 0.22
SCARB2-210ENST00000638567 CORO2BQ9UQ03 480 aa16.46■□□□□ 0.22
SCARB2-210ENST00000638567 FCF1Q9Y324 198 aaKnown RBP16.46■□□□□ 0.22
SCARB2-210ENST00000638567 CDC7O00311 574 aa16.45■□□□□ 0.22
SCARB2-210ENST00000638567 SDHDO14521 159 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms