RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 GTF2BQ00403 316 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 GNA12Q03113 381 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 HSF2Q03933 536 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 KPNB1Q14974 876 aaKnown RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 HSDL2Q6YN16 418 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 SNX33Q8WV41 574 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 ACDQ96AP0 544 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 PLD4Q96BZ4 506 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 OAS3Q9Y6K5 1087 aaKnown RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 A0A1B0GVM2 712 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 TCAF2A6NFQ2 919 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 PRMT5O14744 637 aaPredicted RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 PTPN4P29074 926 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 BMT2Q1RMZ1 405 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 AMZ2Q86W34 360 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 TCAIMQ8N3R3 496 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 EBNA1BP2Q99848 306 aaKnown RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 NOL6Q9H6R4 1146 aaKnown RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 TMEM265A0A087WTH1 108 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 FKBP6O75344 327 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 EOMESO95936 686 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 PPP3R1P63098 170 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 PUM1Q14671 1186 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLN5-208ENST00000636183 MED22Q15528 200 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 TMC3Q7Z5M5 1100 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 ZSCAN4Q8NAM6 433 aaPredicted RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 CKAP2Q8WWK9 683 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 ZNF75CPQ92670 426 aaPredicted RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 MEIS2O14770 477 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 SMARCD3Q6STE5 483 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 CLVS1Q8IUQ0 354 aaPredicted RBP15.95■□□□□ 0.14
CLN5-208ENST00000636183 C12orf56Q8IXR9 622 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 ETNPPLQ8TBG4 499 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 TSPAN18Q96SJ8 248 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 GLOD4Q9HC38 313 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 VWA7Q9Y334 891 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 PCDHB1Q9Y5F3 818 aa15.95■□□□□ 0.14
CLN5-208ENST00000636183 CASKO14936 926 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 AZIN1O14977 448 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 ATP5A1P25705 553 aaKnown RBP15.94■□□□□ 0.14
CLN5-208ENST00000636183 VPS26BQ4G0F5 336 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 BOLLQ8N9W6 283 aaKnown RBP15.94■□□□□ 0.14
CLN5-208ENST00000636183 FBXO5Q9UKT4 447 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 A0A0J9YVX5 310 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 RLN1P04808 185 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 BNIP1Q12981 228 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 MZT2BQ6NZ67 158 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 MKL1Q969V6 931 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 ZNF670Q9BS34 389 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 RIT1Q92963 219 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 MBOAT7Q96N66 472 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 DPEP3Q9H4B8 488 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 PLCL2Q9UPR0 1127 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 TCRBV21S2A2A0A5A6 115 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 NOS1APO75052 506 aaPredicted RBP15.94■□□□□ 0.14
CLN5-208ENST00000636183 ZNF432O94892 652 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 RHBDL3P58872 404 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 GHRHRQ02643 423 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 DEPDC4Q8N2C3 294 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 JPH3Q8WXH2 748 aaPredicted RBP15.94■□□□□ 0.14
CLN5-208ENST00000636183 SEC61A2Q9H9S3 476 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 PCDHGA12O60330 932 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 TSPAN1O60635 241 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 RAB2AP61019 212 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 ABHD13Q7L211 337 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 XPR1Q9UBH6 696 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 MAFFQ9ULX9 164 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
CLN5-208ENST00000636183 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 RGSL1A5PLK6 1076 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 KPNA4O00629 521 aaPredicted RBP15.93■□□□□ 0.14
CLN5-208ENST00000636183 TGFBR2P37173 567 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 SERPINA9Q86WD7 417 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 ZNF227Q86WZ6 799 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 PCED1BQ96HM7 432 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 MPP4Q96JB8 637 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 POLR1AO95602 1720 aaPredicted RBP15.93■□□□□ 0.14
CLN5-208ENST00000636183 NRP1O14786 923 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 TBX1O43435 398 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 HEXBP07686 556 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 STARP49675 285 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 RNF43Q68DV7 783 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 KDM7AQ6ZMT4 941 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 PRR11Q96HE9 360 aaPredicted RBP15.93■□□□□ 0.14
CLN5-208ENST00000636183 U3KQV3 271 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 BCL9O00512 1426 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 PIK3C2BO00750 1634 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 ITSN1Q15811 1721 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 SH3D21A4FU49 640 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 CCL22O00626 93 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 PGRMC2O15173 223 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 TNFRSF21O75509 655 aa15.93■□□□□ 0.14
CLN5-208ENST00000636183 ANXA4P09525 319 aaPredicted RBP15.93■□□□□ 0.14
CLN5-208ENST00000636183 EIF1AXP47813 144 aaKnown RBP15.93■□□□□ 0.14
CLN5-208ENST00000636183 CACNA2D1P54289 1103 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms