RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RANBP10Q6VN20 620 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 KIF6Q6ZMV9 814 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 RBM43Q6ZSC3 357 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 VASH2Q86V25 355 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 LUZP1Q86V48 1076 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CEP57Q86XR8 500 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DDIASQ8IXT1 998 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 LSMEM2Q8N112 164 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 C12orf76Q8N812 135 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 EIF1ADQ8N9N8 165 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DNAAF3Q8N9W5 541 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 POC5Q8NA72 575 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ATAD1Q8NBU5 361 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 C7orf57Q8NEG2 295 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 OR8K5Q8NH50 307 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CCDC26Q8TAB7 109 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SLC2A12Q8TD20 617 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 THRSPQ92748 146 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ZBTB9Q96C00 473 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TRMT61AQ96FX7 289 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PERPQ96FX8 193 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ZBED3Q96IU2 234 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 IFT74Q96LB3 600 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CFAP57Q96MR6 1250 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TRAPPC9Q96Q05 1148 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 COQ7Q99807 217 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 THUMPD2Q9BTF0 503 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SLC29A3Q9BZD2 475 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 GPR61Q9BZJ8 451 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FAM129AQ9BZQ8 928 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TSGA10Q9BZW7 698 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TRIM31Q9BZY9 425 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 POLR1EQ9GZS1 481 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TFB2MQ9H5Q4 396 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CHODLQ9H9P2 273 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 IL21RQ9HBE5 538 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 MAGEE1Q9HCI5 957 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FKBP14Q9NWM8 211 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ARHGEF38Q9NXL2 777 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ASIC5Q9NY37 505 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SMPD3Q9NY59 655 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TUBA8Q9NY65 449 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 EMC3Q9P0I2 261 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 MBD2Q9UBB5 411 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 RNF7Q9UBF6 113 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CD300AQ9UGN4 299 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 OSGIN1Q9UJX0 560 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ANAPC2Q9UJX6 822 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ANGPTL2Q9UKU9 493 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CDH7Q9ULB5 785 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FZD4Q9ULV1 537 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 GAB2Q9UQC2 676 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 MTMR6Q9Y217 621 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PCDHB7Q9Y5E2 793 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TEX264Q9Y6I9 313 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SPATA31A1Q5TZJ5 1347 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CYP3A7-CYP3A51PA0A087WV96 503 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TTC26A0AVF1 554 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FRMD3A2A2Y4 597 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FAM47DPA6NHR8 397 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLC15A5A6NIM6 579 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MBD3L5A6NJ08 208 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ENO4A6NNW6 628 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MYO1GB0I1T2 1018 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 EIF3CLB5ME19 914 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 E9PI62 339 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 H0Y8G0 127 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 K7ERQ8 282 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SOCS6O14544 535 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 DNALI1O14645 258 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TRDMT1O14717 391 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PER2O15055 1255 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HDAC3O15379 428 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RHBDL1O75783 438 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HEXIM1O94992 359 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AKR7A3O95154 331 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 KLHL2O95198 593 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 OR5F1O95221 314 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TGFAP01135 160 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 LIPFP07098 398 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MMP2P08253 660 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 WEE2P0C1S8 567 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 EBLN1P0CF75 366 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 STAG3L3P0CL85 134 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NDUFB7P17568 137 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CDH2P19022 906 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MATN1P21941 496 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CPN2P22792 545 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SP100P23497 879 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CYP3A7P24462 503 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NR2F2P24468 414 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 U2AF2P26368 475 aaKnown RBP eCLIP2.95□□□□□ -1.941e-6■■■□□ 16
PSPC1-208ENST00000635562 DUSP1P28562 367 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CCND2P30279 289 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AXLP30530 894 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 THBS4P35443 961 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLC16A2P36021 539 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 IGHMBP2P38935 993 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HTR2BP41595 481 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms