RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TMEM210A6NLX4 147 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 C4orf47A7E2U8 309 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 AGPSO00116 658 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 TLR4O00206 839 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RAD51BO15315 384 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 BNIP3LO60238 219 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 SAP30O75446 220 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RPS6KA4O75676 772 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 THBS1P07996 1170 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RPA2P15927 270 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 HOXB8P17481 243 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 SRMP19623 302 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 NR1D1P20393 614 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CFL1P23528 166 aaKnown RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 GPTP24298 496 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 POU1F1P28069 291 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CCND3P30281 292 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 LCN1P31025 176 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 GJA4P35212 333 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CPOXP36551 454 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CASRP41180 1078 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 ZP2Q05996 745 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 SLC29A2Q14542 456 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 PABPC1LQ4VXU2 614 aaKnown RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 FAM76BQ5HYJ3 339 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RCSD1Q6JBY9 416 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CEP85Q6P2H3 762 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 LYSMD3Q7Z3D4 306 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RAB44Q7Z6P3 723 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 ABI3BPQ7Z7G0 1075 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 EXOC3L1Q86VI1 746 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CDR2LQ86X02 465 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CCDC155Q8N6L0 562 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 FADS6Q8N9I5 356 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 FSIP1Q8NA03 581 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 GPR156Q8NFN8 814 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CFAP61Q8NHU2 1237 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 DNAAF4Q8WXU2 420 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 SPDL1Q96EA4 605 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 ARSGQ96EG1 525 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 C16orf58Q96GQ5 468 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 CHAMP1Q96JM3 812 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 KLHL15Q96M94 604 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF558Q96NG5 402 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 EPB41L4BQ9H329 900 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 RRAGDQ9NQL2 400 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-213ENST00000630925 EURLQ9NYK6 297 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 OGFRQ9NZT2 677 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 ENTPD2Q9Y5L3 495 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 NOS1P29475 1434 aa4.82□□□□□ -1.64
SDCBP-213ENST00000630925 NEXMIFQ5QGS0 1516 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 C1orf167Q5SNV9 1468 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PNMA6EA0A0J9YXQ4 647 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 C17orf102A2RUQ5 167 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SLC38A8A6NNN8 435 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SUPT3HB4E1H0 165 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 RBAK-RBAKDNI3L0D1 243 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 MEIS1O00470 390 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 N4BP3O15049 544 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SIGLEC6O43699 453 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SNNO75324 88 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 TMCC1O94876 653 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PRLP01236 227 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 GHRHP01286 108 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 C4BPAP04003 597 aaKnown RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SMPD1P17405 629 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PTNP21246 168 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 GGCXP38435 758 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SYKP43405 635 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PIK3CGP48736 1102 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 CCR4P51679 360 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 MTTPP55157 894 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 STX17P56962 302 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SRP54P61011 504 aaKnown RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 YWHAEP62258 255 aaKnown RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 MZT1Q08AG7 82 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 KCNAB1Q14722 419 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 NPY5RQ15761 445 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 IFI44LQ53G44 452 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 TTC38Q5R3I4 469 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF658Q5TYW1 1059 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 LRRC66Q68CR7 880 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SLC27A1Q6PCB7 646 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 GADL1Q6ZQY3 521 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 BHLHA15Q7RTS1 189 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 YRDCQ86U90 279 aaKnown RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 CILP2Q8IUL8 1156 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 TIGD4Q8IY51 512 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 CADM3Q8N126 398 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 LILRA2Q8N149 483 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms