RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 FASTKD3Q14CZ7 662 aaKnown RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 LONRF1Q17RB8 773 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 KHDC1Q4VXA5 237 aaKnown RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 SPANXN3Q5MJ09 141 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 LYPLAL1Q5VWZ2 237 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 MRNIPQ6NTE8 343 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 CEP128Q6ZU80 1094 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 ADGRG6Q86SQ4 1221 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 GALNT13Q8IUC8 556 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 IGDCC3Q8IVU1 814 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 PIANPQ8IYJ0 282 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 KDF1Q8NAX2 398 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 FBXO36Q8NEA4 188 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 HEXDCQ8WVB3 486 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 SGSM3Q96HU1 749 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 FCRL3Q96P31 734 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 OR2M4Q96R27 311 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 TCEAL2Q9H3H9 227 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 RMI1Q9H9A7 625 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 C20orf96Q9NUD7 363 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 ZDHHC18Q9NUE0 388 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 ZDHHC3Q9NYG2 299 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 ATXN10Q9UBB4 475 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 SPASTQ9UBP0 616 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 U3KQA8 63 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 PLXNB3Q9ULL4 1909 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.08
PNKP-221ENST00000627317 ARID1BQ8NFD5 2236 aaPredicted RBP14.52□□□□□ -0.08
PNKP-221ENST00000627317 AGAP14A8MT82 685 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 CD3EAPO15446 510 aaKnown RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 SIGLEC6O43699 453 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 ZNF8P17098 575 aaPredicted RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 ARNTP27540 789 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 CA5AP35218 305 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 TUBB4BP68371 445 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 TMEM115Q12893 351 aaPredicted RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 TCEA2Q15560 299 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 DBN1Q16643 649 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 PRRT3Q5FWE3 981 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 KCTD16Q68DU8 428 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 CRTC3Q6UUV7 619 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 CERS6Q6ZMG9 384 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 TRAPPC5Q8IUR0 188 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 LMX1AQ8TE12 382 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 PYROXD1Q8WU10 500 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 FMO2Q99518 471 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 WDR83Q9BRX9 315 aaKnown RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 LRRC61Q9BV99 259 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 NLGN3Q9NZ94 848 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 MARCH4Q9P2E8 410 aaPredicted RBP14.52□□□□□ -0.09
PNKP-221ENST00000627317 ZNHIT2Q9UHR6 403 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 GPSM3Q9Y4H4 160 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 LRP4O75096 1905 aa14.52□□□□□ -0.09
PNKP-221ENST00000627317 CHD6Q8TD26 2715 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 PKD1L2Q7Z442 2459 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 DSPP15924 2871 aaKnown RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 ZCWPW2A0A1B0GU75 182 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 GOLGA8KD6RF30 607 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 GOLGA8TH3BQL2 631 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 PFDN6O15212 129 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 AQP9O43315 295 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 GRID2O43424 1007 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 NUAK1O60285 661 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 CKMT2P17540 419 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 ACP1P24666 158 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 ARCN1P48444 511 aaKnown RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 CARSP49589 748 aaKnown RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 TTPAP49638 278 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 CBLBQ13191 982 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 CAMK2BQ13554 666 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 ITIH4Q14624 930 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 ELOCQ15369 112 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 STEAP4Q687X5 459 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 ZNF470Q6ECI4 717 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 NEPROQ6NW34 567 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 DHRS13Q6UX07 377 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 UNC5AQ6ZN44 842 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 DET1Q7L5Y6 550 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 SDCCAG8Q86SQ7 713 aaPredicted RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 LRRTM4Q86VH4 590 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 KCNMB4Q86W47 210 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 FSTL5Q8N475 847 aaPredicted RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 FAM181AQ8N9Y4 354 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 GABPB2Q8TAK5 448 aaPredicted RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 CALML6Q8TD86 181 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 SCARF2Q96GP6 870 aaPredicted RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 FAM167BQ9BTA0 163 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 TSPYL1Q9H0U9 437 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 IL1RAPL1Q9NZN1 696 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 PRKAB1Q9Y478 270 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 CSNK1G3Q9Y6M4 447 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 FAM169AQ9Y6X4 670 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 LAMA5O15230 3695 aa14.51□□□□□ -0.09
PNKP-221ENST00000627317 TDRD6O60522 2096 aaKnown RBP14.51□□□□□ -0.09
PNKP-221ENST00000627317 ANKRD11Q6UB99 2663 aaPredicted RBP14.5□□□□□ -0.09
PNKP-221ENST00000627317 IGLV3-16A0A075B6K0 115 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 TMEM8BA6NDV4 472 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 OR2AG2A6NM03 316 aa14.5□□□□□ -0.09
PNKP-221ENST00000627317 FFAR2O15552 330 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms