RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 KIFC1Q9BW19 673 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 RBM4Q9BWF3 364 aaKnown RBP7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ITPAQ9BY32 194 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 AMBNQ9NP70 447 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 KMT5AQ9NQR1 393 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MTMR4Q9NYA4 1195 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 COX16Q9P0S2 106 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MALT1Q9UDY8 824 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MGAT4AQ9UM21 535 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MAPRE3Q9UPY8 281 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ACOT9Q9Y305 439 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 SCN11AQ9UI33 1791 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 TRPM3Q9HCF6 1732 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-205ENST00000617647 CYP2C8P10632 490 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 JUNBP17275 347 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-205ENST00000617647 HTR7P34969 479 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 CSKP41240 450 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 BRCC3P46736 316 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 SOX9P48436 509 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 HNMTP50135 292 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 POU4F1Q01851 419 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 CD47Q08722 323 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 KCNJ11Q14654 390 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 GPAT2Q6NUI2 795 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 KRT74Q7RTS7 529 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ABI1Q8IZP0 508 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ABRAQ8N0Z2 381 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 LNX2Q8N448 690 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 NANPQ8TBE9 248 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MUL1Q969V5 352 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 MARC2Q969Z3 335 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 TMEM80Q96HE8 168 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 CPB2Q96IY4 423 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 RPL10LQ96L21 214 aaKnown RBP7.33□□□□□ -1.24
PDE6A-205ENST00000617647 Q96MT0 163 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 TM9SF3Q9HD45 589 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ACOXLQ9NUZ1 547 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 ZDHHC2Q9UIJ5 367 aa7.33□□□□□ -1.24
PDE6A-205ENST00000617647 FARP1Q9Y4F1 1045 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-205ENST00000617647 C1orf167Q5SNV9 1468 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 LOC100130705A0A1B0GUX0 176 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 TCRBV3S1A0A5B6 114 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 FAM155AB1AL88 458 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 KPNA5O15131 536 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RFPL3O75679 317 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RAB3BP20337 219 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 MAOBP27338 520 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 GRM5P41594 1212 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 DPP6P42658 865 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 S100A12P80511 92 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 EMX1Q04741 257 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CSTF1Q05048 431 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 KCNAB2Q13303 367 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 EMC2Q15006 297 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 BICRALQ6AI39 1079 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 PLD5Q8N7P1 536 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SECISBP2Q96T21 854 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CPNE1Q99829 537 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 LXNQ9BS40 222 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CNPPD1Q9BV87 410 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 PDGFDQ9GZP0 370 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 KLHL31Q9H511 634 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RNF121Q9H920 327 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 KCNH7Q9NS40 1196 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SNTG1Q9NSN8 517 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 GPATCH2LQ9NWQ4 482 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 IL20Q9NYY1 176 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 ZNF624Q9P2J8 865 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 PPIEQ9UNP9 301 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 PRELID3BQ9Y3B1 194 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CASZ1Q86V15 1759 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CTDSP2O14595 271 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 ZNF682O95780 498 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 LTFP02788 710 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 C2P06681 752 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 HLA-FP30511 346 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RFC2P35250 354 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CDK8P49336 464 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 MYL6P60660 151 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 TEKQ02763 1124 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 GALNT2Q10471 571 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SLC10A2Q12908 348 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 ATP6AP1LQ52LC2 224 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 AFTPHQ6ULP2 937 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 ZNF704Q6ZNC4 412 aaPredicted RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SLC34A3Q8N130 599 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RNASE11Q8TAA1 199 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SLC35B2Q8TB61 432 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 UTP15Q8TED0 518 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 RBPMSQ93062 196 aaKnown RBP7.32□□□□□ -1.24
PDE6A-205ENST00000617647 MYDGFQ969H8 173 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 MYLPFQ96A32 169 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SGK3Q96BR1 496 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 CRELD1Q96HD1 420 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 TBCDQ9BTW9 1192 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 SP110Q9HB58 689 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 PRDM8Q9NQV8 689 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 HCN3Q9P1Z3 774 aa7.32□□□□□ -1.24
PDE6A-205ENST00000617647 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms