RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 MYO19Q96H55 970 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 LGR4Q9BXB1 951 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 IFT80Q9P2H3 777 aaPredicted RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 CLPTM1O96005 669 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 CPN2P22792 545 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.4
TCF4-248ENST00000616053 ZNF550Q7Z398 422 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FAM83AQ86UY5 434 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 MARCH7Q9H992 704 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 ABCD2Q9UBJ2 740 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 VEGFDO43915 354 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 MMP3P08254 477 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 DSG2Q14126 1118 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 C16orf86Q6ZW13 317 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 ADAMTSL2Q86TH1 951 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 ZNF540Q8NDQ6 660 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 NDNFQ8TB73 568 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 LPPQ93052 612 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 C1GALT1C1Q96EU7 318 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 GLP1RP43220 463 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FLT3LGP49771 235 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 CAP1Q01518 475 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FOXRED2Q8IWF2 684 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 MTMR10Q9NXD2 777 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 BAIAP2Q9UQB8 552 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 DHX15O43143 795 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 ACTR1BP42025 376 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 SEC23AQ15436 765 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 STEAP3Q658P3 488 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 SIPA1Q96FS4 1042 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 EIF1AYO14602 144 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 CPNE3O75131 537 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 ZNF81P51508 661 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 XIAPP98170 497 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 GCNT1Q02742 428 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 AMER2Q8N7J2 671 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FNIP1Q8TF40 1166 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 MRPS30Q9NP92 439 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 PCDHGB2Q9Y5G2 931 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FAM221BA6H8Z2 402 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 DLX3O60479 287 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 UGT2B11O75310 529 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ITPKAP23677 461 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 MAPK12P53778 367 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SOX10P56693 466 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 N4BP2L1Q5TBK1 243 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 ARL9Q6T311 187 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 DPY19L4Q7Z388 723 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 PTCD3Q96EY7 689 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 OR12D3Q9UGF7 316 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 CYP3A4P08684 503 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SLC26A11Q86WA9 606 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 CMTR2Q8IYT2 770 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 SEMA3CQ99985 751 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SLC25A23Q9BV35 468 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 GMEB1Q9Y692 573 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 PLEKHG1Q9ULL1 1385 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 GP5P40197 560 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 CREB5Q02930 508 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 PTPRNQ16849 979 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 UBAP2Q5T6F2 1119 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 C6orf120Q7Z4R8 191 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SLC34A3Q8N130 599 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 PHB2Q99623 299 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 IL7RP16871 459 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ADSSP30520 456 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 PPATQ06203 517 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SPESP1Q6UW49 350 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ADAM28Q9UKQ2 775 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 CFL2Q9Y281 166 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 TRBC1P01850 177 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 SELPP16109 830 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ZNF8P17098 575 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 ZNF135P52742 658 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms