RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SEMA4BQ9NPR2 832 aaPredicted RBP22.14■■□□□ 1.13
SHANK2-220ENST00000608988 NECTIN3Q9NQS3 549 aa22.14■■□□□ 1.13
SHANK2-220ENST00000608988 TAS2R13Q9NYV9 303 aa22.14■■□□□ 1.13
SHANK2-220ENST00000608988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.14■■□□□ 1.13
SHANK2-220ENST00000608988 GPC6Q9Y625 555 aaPredicted RBP22.14■■□□□ 1.13
SHANK2-220ENST00000608988 OR51F1A6NGY5 319 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 ECI2O75521 394 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 CCDC159P0C7I6 412 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 PAX3P23760 479 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 HOXD12P35452 270 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 EIF2B2P49770 351 aaKnown RBP22.13■■□□□ 1.13
SHANK2-220ENST00000608988 PPP2R2BQ00005 443 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 DSC2Q02487 901 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SPCS2Q15005 226 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 MAPRE1Q15691 268 aaKnown RBP22.13■■□□□ 1.13
SHANK2-220ENST00000608988 BCL2A1Q16548 175 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 ZC3H12BQ5HYM0 836 aaKnown RBP22.13■■□□□ 1.13
SHANK2-220ENST00000608988 AGAP7PQ5VUJ5 663 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SPNS2Q8IVW8 549 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SH3RF2Q8TEC5 729 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SERPINB11Q96P15 392 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 CGREF1Q99674 301 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SGIP1Q9BQI5 828 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 AGO3Q9H9G7 860 aaKnown RBP22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SP110Q9HB58 689 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 FBXO8Q9NRD0 319 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 PCTPQ9UKL6 214 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 GABARAPO95166 117 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 MT-ND1P03886 318 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 THP07101 528 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 MAPK10P53779 464 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 AQP6Q13520 282 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 C6orf136Q5SQH8 315 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 SULT1C3Q6IMI6 304 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 OR4L1Q8NH43 312 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 ARRDC2Q8TBH0 407 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 PROKR1Q8TCW9 393 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 TMEM248Q9NWD8 314 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 UXTQ9UBK9 157 aaPredicted RBP22.13■■□□□ 1.13
SHANK2-220ENST00000608988 PCDHGA8Q9Y5G5 932 aa22.13■■□□□ 1.13
SHANK2-220ENST00000608988 GOLGB1Q14789 3259 aaKnown RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 ZNF99A8MXY4 864 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 AQP9O43315 295 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 HTR1AP08908 422 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 CES1P23141 567 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 HTR1BP28222 390 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 IL12AP29459 219 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 RYKP34925 604 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 CASP2P42575 452 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 RXRGP48443 463 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 YWHAHQ04917 246 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 ATP6AP1LQ52LC2 224 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 GPRIN3Q6ZVF9 776 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 NECAB2Q7Z6G3 386 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 C14orf80Q86SX3 495 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 BRSK1Q8TDC3 778 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 ZFP42Q96MM3 310 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 NODALQ96S42 347 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 ZNF382Q96SR6 550 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 RTP3Q9BQQ7 232 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 ABHD16BQ9H3Z7 469 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 PRDM5Q9NQX1 630 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 GIT1Q9Y2X7 761 aa22.12■■□□□ 1.13
SHANK2-220ENST00000608988 TIMM13Q9Y5L4 95 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-220ENST00000608988 NDUFS2O75306 463 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 RHOBTB1O94844 696 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 KCNH1O95259 989 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 CYP11A1P05108 521 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 TCF3P15923 654 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 CD9P21926 228 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 GRK3P35626 688 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 HPCAL1P37235 193 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 RAD23AP54725 363 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 SLC10A7Q0GE19 358 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 POLD3Q15054 466 aaPredicted RBP22.11■■□□□ 1.13
SHANK2-220ENST00000608988 CTF1Q16619 201 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 C1QTNF12Q5T7M4 302 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 FBLIM1Q8WUP2 373 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 CASP10Q92851 521 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 PKMYT1Q99640 499 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 ANKHQ9HCJ1 492 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 MPP6Q9NZW5 540 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 C3orf18Q9UK00 162 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 TIMM22Q9Y584 194 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 KPNA6O60684 536 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 IL7RP16871 459 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 PCMT1P22061 227 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 CLCNKBP51801 687 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 IL10RBQ08334 325 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 DGUOKQ16854 277 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 SLC2A7Q6PXP3 512 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 DCPSQ96C86 337 aaKnown RBP22.11■■□□□ 1.13
SHANK2-220ENST00000608988 HMCESQ96FZ2 354 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 HGH1Q9BTY7 390 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 ZYG11BQ9C0D3 744 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 MAGIXQ9H6Y5 334 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 SLAMF8Q9P0V8 285 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 MTRRQ9UBK8 725 aa22.11■■□□□ 1.13
SHANK2-220ENST00000608988 VPS9D1Q9Y2B5 631 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms