RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 ZNHIT6Q9NWK9 470 aaKnown RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 DDX56Q9NY93 547 aaKnown RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 SAE1Q9UBE0 346 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 ANAPC2Q9UJX6 822 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 LOC285095A0A1B0GVY8 99 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A9O60656 530 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 KATNA1O75449 491 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 SPAG6O75602 509 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 KIAA0754O94854 1291 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 NDUFA10O95299 355 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 VCLP18206 1134 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A6P19224 532 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A1P22309 533 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A4P22310 534 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 CD68P34810 354 aaPredicted RBP13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 HMGCLP35914 325 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 CASRP41180 1078 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 GTF2H3Q13889 308 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 IL11RAQ14626 422 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 NOMO1Q15155 1222 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 LLGL1Q15334 1064 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 IRGCQ6NXR0 463 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 TTC30BQ8N4P2 665 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 BRSK1Q8TDC3 778 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 KLHL6Q8WZ60 621 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 CCDC42Q96M95 316 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 IL26Q9NPH9 171 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 FAM153AQ9UHL3 310 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 CROTQ9UKG9 612 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 MAST4O15021 2626 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
POLR2J3-219ENST00000608621 KCNJ13O60928 360 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 POP7O75817 140 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 FURINP09958 794 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 FGF5P12034 268 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 NFKB1P19838 968 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 HALP42357 657 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 SLC1A1P43005 524 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 CAPZBP47756 277 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 NR2C2P49116 596 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 WNT3AP56704 352 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 SEPT6Q14141 434 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 TRIM14Q14142 442 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 ERV3-1Q14264 604 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 PRKD1Q15139 912 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 KAZNQ674X7 775 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 STAMBPL1Q96FJ0 436 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 RAB33BQ9H082 229 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 TRABDQ9H4I3 376 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 IL17CQ9P0M4 197 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 KCTD3Q9Y597 815 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 KCNMB2Q9Y691 235 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
POLR2J3-219ENST00000608621 FLNCQ14315 2725 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 ZNF106Q9H2Y7 1883 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 F5H423 210 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 BUD23O43709 281 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CST8O60676 142 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 EPOP01588 193 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CCNYL3P0C7X3 344 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 PECAM1P16284 738 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 COMTP21964 271 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CA5AP35218 305 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CDKN2BP42772 138 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CHRNA4P43681 627 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CTSCP53634 463 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 PPP1CAP62136 330 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 FOXK1P85037 733 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 TFDP2Q14188 446 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 CHRNA6Q15825 494 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 LACTB2Q53H82 288 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 SIRPB2Q5JXA9 342 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 TMEM220Q6QAJ8 160 aa13.12□□□□□ -0.31
POLR2J3-219ENST00000608621 PID1Q7Z2X4 250 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms