RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C1QA	P02745	245 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZNF883	P0CG24	379 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	JUND	P17535	347 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	ACRV1	P26436	265 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	CDKN1C	P49918	316 aa	Predicted RBP	21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	HK3	P52790	923 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	BNIP3	Q12983	259 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	CTBP1	Q13363	440 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	KHDC1	Q4VXA5	237 aa	Known RBP	21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	LDLRAP1	Q5SW96	308 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	GPRC6A	Q5T6X5	926 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	RD3	Q7Z3Z2	195 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	DENND6A	Q8IWF6	608 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	PIANP	Q8IYJ0	282 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	C2CD4A	Q8NCU7	369 aa	Predicted RBP	21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	HEXDC	Q8WVB3	486 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	CPNE1	Q99829	537 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	PPCS	Q9HAB8	311 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	CYP4F12	Q9HCS2	524 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	INTS10	Q9NVR2	710 aa	Known RBP	21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZDHHC3	Q9NYG2	299 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	ATXN10	Q9UBB4	475 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	APOBEC3B	Q9UH17	382 aa	Known RBP	21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	PLAA	Q9Y263	795 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	DGKB	Q9Y6T7	804 aa		21.68	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZFC3H1	O60293	1989 aa	Known RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	C4orf47	A7E2U8	309 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	CXorf49	A8MYA2	514 aa	Predicted RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	POC1B-GALNT4	F8VUJ3	575 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	PIAS2	O75928	621 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	TNF	P01375	233 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	FUCA1	P04066	466 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	RALB	P11234	206 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	MSH2	P43246	934 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	BLK	P51451	505 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	EIF3B	P55884	814 aa	Known RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	HNRNPK	P61978	463 aa	Known RBP eCLIP	21.67	■■□□□ 1.06	3e-6	■■■□□ 15.1
LTBP4-227	ENST00000600026	ILF2	Q12905	390 aa	Known RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	SEMA3A	Q14563	771 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	ITIH4	Q14624	930 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	CASP8	Q14790	479 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	EFTUD2	Q15029	972 aa	Known RBP eCLIP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	DBN1	Q16643	649 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	TYSND1	Q2T9J0	566 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	UAP1L1	Q3KQV9	507 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	STPG1	Q5TH74	334 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	HDX	Q7Z353	690 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	STRA8	Q7Z7C7	330 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	GALNT7	Q86SF2	657 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	ADGRG6	Q86SQ4	1221 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	LDB1	Q86U70	411 aa	Predicted RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	ANKRD7	Q92527	254 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	MRRF	Q96E11	262 aa	Known RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	COPS8	Q99627	209 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	LRRC61	Q9BV99	259 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	CARS2	Q9HA77	564 aa	Known RBP	21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	TRIM39	Q9HCM9	518 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	FETUB	Q9UGM5	382 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	SUFU	Q9UMX1	484 aa		21.67	■■□□□ 1.06
LTBP4-227	ENST00000600026	LAMA1	P25391	3075 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	CFAP99	D6REC4	459 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SHBG	P04278	402 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	INHBA	P08476	426 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZNF7	P17097	686 aa	Predicted RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	AKT1	P31749	480 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	GNPDA1	P46926	289 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	LEPR	P48357	1165 aa	Known RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	LIMK1	P53667	647 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	CSE1L	P55060	971 aa	Known RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	GATAD2A	Q86YP4	633 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZNF548	Q8NEK5	533 aa	Predicted RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SAP25	Q8TEE9	199 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	DCUN1D1	Q96GG9	259 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SCARF2	Q96GP6	870 aa	Predicted RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	PAFAH2	Q99487	392 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC13A1	Q9BZW2	595 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZCCHC2	Q9C0B9	1178 aa	Known RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	OR2AG1	Q9H205	316 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	FBXO6	Q9NRD1	293 aa	Predicted RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC17A6	Q9P2U8	582 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC24A2	Q9UI40	661 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	BPTF	Q12830	3046 aa		21.66	■■□□□ 1.06
LTBP4-227	ENST00000600026	PIAS1	O75925	651 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	S1PR4	O95977	384 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	ZNF8	P17098	575 aa	Predicted RBP	21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	MSH3	P20585	1137 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	GP5	P40197	560 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	CD151	P48509	253 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	MPP1	Q00013	466 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	GRTP1	Q5TC63	336 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	LRIG3	Q6UXM1	1119 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	TAOK1	Q7L7X3	1001 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	KANSL1	Q7Z3B3	1105 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	SLC44A1	Q8WWI5	657 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	RMI1	Q9H9A7	625 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	UCKL1	Q9NWZ5	548 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	SPAST	Q9UBP0	616 aa		21.65	■■□□□ 1.06
LTBP4-227	ENST00000600026	PCDHGB2	Q9Y5G2	931 aa		21.65	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms