RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZPBPQ9BS86 351 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TIMM29Q9BSF4 260 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 EPB41L1Q9H4G0 881 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZNF768Q9H5H4 540 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 POT1Q9NUX5 634 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 CROTQ9UKG9 612 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TP53TG5Q9Y2B4 290 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 MDC1Q14676 2089 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 DOCK10Q96BY6 2186 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 MAST4O15021 2626 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ZNF487B1APH4 448 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 AKR1B10O60218 316 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 NDUFA10O95299 355 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 CTSCP53634 463 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ADCY2Q08462 1091 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 MAP7Q14244 749 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 TEX44Q53QW1 395 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 CACHD1Q5VU97 1274 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 PDPK2PQ6A1A2 396 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 IRGCQ6NXR0 463 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 KDELC1Q6UW63 502 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 CERS6Q6ZMG9 384 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 FAM83HQ6ZRV2 1179 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 RASGRP3Q8IV61 690 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 TTC30BQ8N4P2 665 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 SLC25A41Q8N5S1 370 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ESX1Q8N693 406 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 GDAP1Q8TB36 358 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 HAUS1Q96CS2 278 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 VPS35Q96QK1 796 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 MAK16Q9BXY0 300 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 LNPEPQ9UIQ6 1025 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 PSMD13Q9UNM6 376 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 ICE1Q9Y2F5 2266 aa11.88□□□□□ -0.51
SOX2-OT-228ENST00000597828 SSU72P8A0A1W2PR75 194 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 GPR89AB7ZAQ6 455 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 VEGFDO43915 354 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A9O60656 530 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 GPR89BP0CG08 455 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A6P19224 532 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A1P22309 533 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A4P22310 534 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 CASRP41180 1078 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 TMEM115Q12893 351 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 KCNAB1Q14722 419 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 PTPRCAPQ14761 206 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 SLC14A2Q15849 920 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 SIRPB2Q5JXA9 342 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 KAZNQ674X7 775 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 DUS1LQ6P1R4 473 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 C6orf15Q6UXA7 325 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 FAM151BQ6UXP7 276 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 PRSS42Q7Z5A4 293 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 RASGEF1AQ8N9B8 481 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 APOBEC4Q8WW27 367 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 CXorf40BQ96DE9 158 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 STAMBPL1Q96FJ0 436 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 MRGPRX2Q96LB1 330 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 TEKT5Q96M29 485 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 EFHD1Q9BUP0 239 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 TRIT1Q9H3H1 467 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A7Q9HAW7 530 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A10Q9HAW8 530 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 UGT1A8Q9HAW9 530 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 SLC40A1Q9NP59 571 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 RAD18Q9NS91 495 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 LCMT1Q9UIC8 334 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 KCNMB2Q9Y691 235 aa11.87□□□□□ -0.51
SOX2-OT-228ENST00000597828 ESPL1Q14674 2120 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 IGHV5-51A0A0C4DH38 117 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 OR2AG2A6NM03 316 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 GAPDHSO14556 408 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 CST8O60676 142 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 MFAP3LO75121 409 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 KATNA1O75449 491 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 SPAG6O75602 509 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 COMTP21964 271 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 IDSP22304 550 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 CDKN2BP42772 138 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 MARCKSL1P49006 195 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 WNT3AP56704 352 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 FOXK1P85037 733 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 GTF2H3Q13889 308 aa11.86□□□□□ -0.51
SOX2-OT-228ENST00000597828 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms