RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 PMPCBO75439 489 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 CREG1O75629 220 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 MT-CYBP00156 380 aaPredicted RBP10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 FGF5P12034 268 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 GP1BBP13224 206 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 BRAFP15056 766 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 CASP14P31944 242 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 HALP42357 657 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 CAPZBP47756 277 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 DNASE1L3Q13609 305 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 GPR18Q14330 331 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 PDK1Q15118 436 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 KHDC1Q4VXA5 237 aaKnown RBP10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 TCTN3Q6NUS6 607 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 NPNTQ6UXI9 565 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 WASH2PQ6VEQ5 465 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 ASB18Q6ZVZ8 466 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 PRSS42Q7Z5A4 293 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 TMEM135Q86UB9 458 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 RFX6Q8HWS3 928 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 ZNF547Q8IVP9 402 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 FAM26EQ8N5C1 309 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 SIDT2Q8NBJ9 832 aaKnown RBP10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 SPATA22Q8NHS9 363 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 BRSK1Q8TDC3 778 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 KLHL6Q8WZ60 621 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 SRPK1Q96SB4 655 aaKnown RBP10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 GLOD4Q9HC38 313 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC40A1Q9NP59 571 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 WASH6PQ9NQA3 447 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 UBP1Q9NZI7 540 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 NFKBIL1Q9UBC1 381 aaPredicted RBP10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 TLK1Q9UKI8 766 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 RARRES3Q9UL19 164 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 SHANK1Q9Y566 2161 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 MAST4O15021 2626 aa10.37□□□□□ -0.75
CHMP2A-202ENST00000596708 A0A0A6YYK5 440 aaPredicted RBP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 AURKAO14965 403 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 KCNJ13O60928 360 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 RFPL1O75677 317 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 NDST3O95803 873 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 NTRK1P04629 796 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 TNNT1P13805 278 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 ZFXP17010 805 aaPredicted RBP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 NELFEP18615 380 aaKnown RBP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 ARL4DP49703 201 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 DYNLT1P63172 113 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 ATP13A5Q4VNC0 1218 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 AGAP9Q5VTM2 703 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC9A4Q6AI14 798 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 CT55Q8WUE5 264 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 MIB2Q96AX9 1013 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 VPS35Q96QK1 796 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 XPO4Q9C0E2 1151 aaKnown RBP10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 RAB33BQ9H082 229 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 EPHA6Q9UF33 1036 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 TMPRSS11EQ9UL52 423 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 NENFQ9UMX5 172 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 PSMD13Q9UNM6 376 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 MAN2B2Q9Y2E5 1009 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 WDR37Q9Y2I8 494 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 SPO11Q9Y5K1 396 aa10.36□□□□□ -0.75
CHMP2A-202ENST00000596708 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 IGHV5-51A0A0C4DH38 117 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 BLACEA4D250 179 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TTLL8A6PVC2 850 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 POP7O75817 140 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TIAF1O95411 115 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 KRT1P04264 644 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 GYPCP04921 128 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 PPP1CAP62136 330 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 RPS15P62841 145 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 ACY1Q03154 408 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TUBB3Q13509 450 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 KCNAB1Q14722 419 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 PLCL1Q15111 1095 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 PPP2R5EQ16537 467 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC18A3Q16572 532 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 KLHL35Q6PF15 583 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TMEM220Q6QAJ8 160 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 C11orf96Q7Z7L8 435 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 AMZ2Q86W34 360 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC25A41Q8N5S1 370 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC35G2Q8TBE7 412 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 UBXN4Q92575 508 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 MAP3K3Q99759 626 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 LRRC4CQ9HCJ2 640 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 IFNKQ9P0W0 207 aa10.35□□□□□ -0.75
CHMP2A-202ENST00000596708 PCDHGA6Q9Y5G7 932 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms