RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CACHD1Q5VU97 1274 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 TADA1Q96BN2 335 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 RNF31Q96EP0 1072 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 ELMO2Q96JJ3 720 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 TTC25Q96NG3 672 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 XPO4Q9C0E2 1151 aaKnown RBP22.26■■□□□ 1.15
SSBP4-203ENST00000593641 GLOD4Q9HC38 313 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 BPIFA1Q9NP55 256 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 SLC40A1Q9NP59 571 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 ZNHIT6Q9NWK9 470 aaKnown RBP22.26■■□□□ 1.15
SSBP4-203ENST00000593641 TRIM10Q9UDY6 481 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 LNPEPQ9UIQ6 1025 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 KCND3Q9UK17 655 aa22.26■■□□□ 1.15
SSBP4-203ENST00000593641 SSU72P8A0A1W2PR75 194 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 CCNYL3P0C7X3 344 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 F8A1P23610 371 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 TMEM115Q12893 351 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-203ENST00000593641 KHDC1Q4VXA5 237 aaKnown RBP22.25■■□□□ 1.15
SSBP4-203ENST00000593641 IRGCQ6NXR0 463 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 FAM92BQ6ZTR7 304 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 PPP1R3BQ86XI6 285 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 RHOT2Q8IXI1 618 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 BRSK1Q8TDC3 778 aa22.25■■□□□ 1.15
SSBP4-203ENST00000593641 PRR19A6NJB7 356 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 AURKAO14965 403 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 KIF1CO43896 1103 aaKnown RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 KATNA1O75449 491 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 MT-ND3P03897 115 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 ERV3-1Q14264 604 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 ASTE1Q2TB18 679 aaPredicted RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 ATP13A5Q4VNC0 1218 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 LRRC38Q5VT99 294 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 BZW1Q7L1Q6 419 aaKnown RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 OR8K1Q8NGG5 319 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 RNF25Q96BH1 459 aaPredicted RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 ZCCHC2Q9C0B9 1178 aaKnown RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 TRABDQ9H4I3 376 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 DDX56Q9NY93 547 aaKnown RBP22.24■■□□□ 1.15
SSBP4-203ENST00000593641 UBP1Q9NZI7 540 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 EPHA6Q9UF33 1036 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 POLHQ9Y253 713 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 SPO11Q9Y5K1 396 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 KCNMB2Q9Y691 235 aa22.24■■□□□ 1.15
SSBP4-203ENST00000593641 MKRN2OSH3BPM6 223 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 KCNJ13O60928 360 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 FGF5P12034 268 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 PTPN3P26045 913 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 HMGCLP35914 325 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 KLRB1Q12918 225 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 TRIM14Q14142 442 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 IGFBP7Q16270 282 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.23■■□□□ 1.15
SSBP4-203ENST00000593641 ZDHHC20Q5W0Z9 365 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 B4GALNT4Q76KP1 1039 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 KLHL6Q8WZ60 621 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 TEKT5Q96M29 485 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 DNAJC7Q99615 494 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 RAB33BQ9H082 229 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 PDE7BQ9NP56 450 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 FAM153AQ9UHL3 310 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 TP53TG5Q9Y2B4 290 aa22.23■■□□□ 1.15
SSBP4-203ENST00000593641 GOLGA6L3A6NEY3 463 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 SPAG6O75602 509 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 TNNT1P13805 278 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 SRSF1Q07955 248 aaKnown RBP eCLIP22.22■■□□□ 1.155e-7■□□□□ 10.3
SSBP4-203ENST00000593641 UBAP2LQ14157 1087 aaKnown RBP22.22■■□□□ 1.15
SSBP4-203ENST00000593641 KLHL35Q6PF15 583 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 C11orf96Q7Z7L8 435 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 AMZ2Q86W34 360 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 RHOT1Q8IXI2 618 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 TFB1MQ8WVM0 346 aaKnown RBP22.22■■□□□ 1.15
SSBP4-203ENST00000593641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.22■■□□□ 1.15
SSBP4-203ENST00000593641 ANKMY1Q9P2S6 941 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 TMPRSS11EQ9UL52 423 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 PADI1Q9ULC6 663 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 WDR37Q9Y2I8 494 aa22.22■■□□□ 1.15
SSBP4-203ENST00000593641 SPENQ96T58 3664 aaKnown RBP22.21■■□□□ 1.15
SSBP4-203ENST00000593641 TPM1P09493 284 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 NELFEP18615 380 aaKnown RBP22.21■■□□□ 1.15
SSBP4-203ENST00000593641 SPAM1P38567 509 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 SLC1A1P43005 524 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 NR2C2P49116 596 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 DNASE1L3Q13609 305 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 TFDP2Q14188 446 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 PRKD1Q15139 912 aaPredicted RBP22.21■■□□□ 1.15
SSBP4-203ENST00000593641 PPP2R5EQ16537 467 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 SIDT2Q8NBJ9 832 aaKnown RBP22.21■■□□□ 1.15
SSBP4-203ENST00000593641 UBXN4Q92575 508 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 TWSG1Q9GZX9 223 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 RARRES3Q9UL19 164 aa22.21■■□□□ 1.15
SSBP4-203ENST00000593641 CDC14CA4D256 554 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 FECHP22830 423 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 WNT3AP56704 352 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 DMPKQ09013 629 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 TUBB3Q13509 450 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 PLCL1Q15111 1095 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 LDLRAP1Q5SW96 308 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 TCTN3Q6NUS6 607 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 MFSD7Q6UXD7 560 aa22.2■■□□□ 1.14
SSBP4-203ENST00000593641 FAM151BQ6UXP7 276 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms