RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ARMCX4Q5H9R4 360 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ABCB10Q9NRK6 738 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 FAM220BPB1ANY3 271 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 CDC7O00311 574 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 TP73O15350 636 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 CNTN5O94779 1100 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 RAP2AP10114 183 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ITPKAP23677 461 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 UFM1P61960 85 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 POLR2LP62875 67 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 USP41Q3LFD5 358 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 FAM174BQ3ZCQ3 159 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 PIGGQ5H8A4 983 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 SPG21Q9NZD8 308 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 KLHL3Q9UH77 587 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 EVLQ9UI08 416 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 EEFSECP57772 596 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 HPCAP84074 193 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 SCAPQ12770 1279 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 RABL3Q5HYI8 236 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 SERPINA9Q86WD7 417 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 HEATR4Q86WZ0 1026 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 PNPT1Q8TCS8 783 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 CD320Q9NPF0 282 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 SELENONQ9NZV5 590 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 FCF1Q9Y324 198 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 H3BN98 237 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 UGT2B11O75310 529 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 STK16O75716 305 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ESR1P03372 595 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 DBTP11182 482 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ABRQ12979 859 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ZBED5Q49AG3 693 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ANKRD46Q86W74 232 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 SLC13A3Q8WWT9 602 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ARMC7Q9H6L4 198 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 ACTR3BQ9P1U1 418 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 GALPQ9UBC7 116 aa16.94■□□□□ 0.3
SMARCA4-215ENST00000590574 PTGER3P43115 390 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 SPANXN2Q5MJ10 180 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 HIPK1Q86Z02 1210 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 SUSD3Q96L08 255 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 TMEM74Q96NL1 305 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 AARSD1Q9BTE6 412 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 RASSF1Q9NS23 344 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CXCR6O00574 342 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 FTH1P02794 183 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CYP4F2P78329 520 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CYP4F3Q08477 520 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CASP12Q6UXS9 341 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CERS6Q6ZMG9 384 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 PDP1Q9P0J1 537 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 TRPC4Q9UBN4 977 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 PDE10AQ9Y233 779 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 SYN3O14994 580 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 DENRO43583 198 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CLDN9O95484 217 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CATP04040 527 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 FLT3LGP49771 235 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 C1DQ13901 141 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 MS4A13Q5J8X5 152 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 EGFLAMQ63HQ2 1017 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 SLC2A7Q6PXP3 512 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 ZNF534Q76KX8 674 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 ZC3H7AQ8IWR0 971 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 FBXL20Q96IG2 436 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 COX4I2Q96KJ9 171 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 KLHL20Q9Y2M5 609 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 ENPP3O14638 875 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 MAFKO60675 156 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 GSTM1P09488 218 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 CYP20A1Q6UW02 462 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 HID1Q8IV36 788 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 OLFM1Q99784 485 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 GIMAP4Q9NUV9 329 aa16.93■□□□□ 0.3
SMARCA4-215ENST00000590574 SCELO95171 688 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 CDH1P12830 882 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 ARMC4Q5T2S8 1044 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 OR52E8Q6IFG1 317 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 MYDGFQ969H8 173 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 FNIP2Q9P278 1114 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 CCDC159P0C7I6 412 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 LEPRP48357 1165 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 CDK9P50750 372 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 MYLK3Q32MK0 819 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 BRD9Q9H8M2 597 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 TRMT13Q9NUP7 481 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 ENOPH1Q9UHY7 261 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 A0A1B0GVM2 712 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 TCAF2A6NFQ2 919 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 GRID2O43424 1007 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 SLC26A3P40879 764 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms