RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SLC25A45Q8N413 288 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 OTUD6BQ8N6M0 293 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 AVL9Q8NBF6 648 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 OR2L2Q8NH16 312 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 OR4C6Q8NH72 309 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 RHBDD1Q8TEB9 315 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 SGF29Q96ES7 293 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CERS2Q96G23 380 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 PWWP2AQ96N64 755 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 PANX3Q96QZ0 392 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CCM2Q9BSQ5 444 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 LRRC61Q9BV99 259 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 TMEM168Q9H0V1 697 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CCDC68Q9H2F9 335 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 MRPL40Q9NQ50 206 aaKnown RBP8.94□□□□□ -0.98
CIRBP-218ENST00000588344 PPANQ9NQ55 473 aaKnown RBP8.94□□□□□ -0.98
CIRBP-218ENST00000588344 WASH6PQ9NQA3 447 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 KLHL42Q9P2K6 505 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 GNPTGQ9UJJ9 305 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CDV3Q9UKY7 258 aaKnown RBP8.94□□□□□ -0.98
CIRBP-218ENST00000588344 ACSL5Q9ULC5 683 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CORO1CQ9ULV4 474 aaPredicted RBP8.94□□□□□ -0.98
CIRBP-218ENST00000588344 CHMP2BQ9UQN3 213 aa8.94□□□□□ -0.98
CIRBP-218ENST00000588344 EML5Q05BV3 1969 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 TRPM6Q9BX84 2022 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 MGAT4DA6NG13 374 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 SLC30A4O14863 429 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 GDF9O60383 454 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 LDOC1O95751 146 aaPredicted RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CDK4P11802 303 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CD59P13987 128 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CSRP1P21291 193 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 IDSP22304 550 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 RPS3P23396 243 aaKnown RBP eCLIP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 STX2P32856 288 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 LEPRP48357 1165 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 PRLHRP49683 370 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CDKN1CP49918 316 aaPredicted RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 B4GALNT1Q00973 533 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CTBSQ01459 385 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 RPA4Q13156 261 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 NAB1Q13506 487 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 INSCQ1MX18 579 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 KHDC1Q4VXA5 237 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 AGAP9Q5VTM2 703 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ZNF470Q6ECI4 717 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 PTRHD1Q6GMV3 140 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ZCCHC8Q6NZY4 707 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 KDM7AQ6ZMT4 941 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 TRMT10CQ7L0Y3 403 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ALYREFQ86V81 257 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 SLC26A11Q86WA9 606 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ZNF547Q8IVP9 402 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 FAM46DQ8NEK8 389 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 SETD7Q8WTS6 366 aaKnown RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 CFAP36Q96G28 342 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 RTKNQ9BST9 563 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 DPEP2Q9H4A9 486 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ARFGAP3Q9NP61 516 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 RXFP3Q9NSD7 469 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 ZFATQ9P243 1243 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 FBXO5Q9UKT4 447 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 PCOLCE2Q9UKZ9 415 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 PNMA8BQ9ULN7 279 aaPredicted RBP8.93□□□□□ -0.98
CIRBP-218ENST00000588344 NFU1Q9UMS0 254 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 GPR179Q6PRD1 2367 aa8.93□□□□□ -0.98
CIRBP-218ENST00000588344 KIR2DS5A0A0G2JLQ3 304 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 A0A0G2JNG1 304 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 OR2AG2A6NM03 316 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 KIR2DS3K7RE56 304 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 LIN7AO14910 233 aaPredicted RBP8.92□□□□□ -0.98
CIRBP-218ENST00000588344 GPR39O43194 453 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 SDC3O75056 442 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 BANF1O75531 89 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 S1PR4O95977 384 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ERVK-10P10266 1014 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ACP5P13686 325 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 CA5AP35218 305 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ACTR1BP42025 376 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 SKIV2L2P42285 1042 aaKnown RBP8.92□□□□□ -0.98
CIRBP-218ENST00000588344 HALP42357 657 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ACTR1AP61163 376 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 IL9RQ01113 521 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ILKQ13418 452 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 C1orf61Q13536 156 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 KIR2DS5Q14953 304 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 HP1BP3Q5SSJ5 553 aaPredicted RBP8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ZNF648Q5T619 568 aaPredicted RBP8.92□□□□□ -0.98
CIRBP-218ENST00000588344 TEDDM1Q5T9Z0 273 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 METRNLQ641Q3 311 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 UGT3A1Q6NUS8 523 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 WDR93Q6P2C0 686 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 ABRAXAS1Q6UWZ7 409 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 CCNI2Q6ZMN8 369 aaPredicted RBP8.92□□□□□ -0.98
CIRBP-218ENST00000588344 DET1Q7L5Y6 550 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 GLRX5Q86SX6 157 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 PIP4P1Q86T03 277 aa8.92□□□□□ -0.98
CIRBP-218ENST00000588344 GATAD2AQ86YP4 633 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms