RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TRIOO75962 3097 aa5.72□□□□□ -1.49
SDF2-206ENST00000587788 C2orf81A6NN90 581 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 H0Y3Z8 333 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 J3KR12 359 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 LINC01387J3KSC0 135 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CD3EAPO15446 510 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 GRID2O43424 1007 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 DCXO43602 365 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 KDELR3O43731 214 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 PEX1O43933 1283 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 VPS4BO75351 444 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MOSPD3O75425 235 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 RPP40O75818 363 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 KRT36O76013 467 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CNTN5O94779 1100 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CKMP06732 381 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 RHOP08100 348 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MMP2P08253 660 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 HMBSP08397 361 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 RPSAP08865 295 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 GSTP1P09211 210 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 SBK3P0C264 359 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ATXN1LP0C7T5 689 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 CCDC166P0CW27 439 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ANPEPP15144 967 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 GJA1P17302 382 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 IMPDH1P20839 514 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SAT1P21673 171 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CD9P21926 228 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 PIK3R1P27986 724 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ARRB2P32121 409 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CPA2P48052 419 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ATP4BP51164 291 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SUOXP51687 545 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CLCN2P51788 898 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 INHBCP55103 352 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MTTPP55157 894 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ATP6V0D1P61421 351 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MPP1Q00013 466 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 DSC2Q02487 901 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 GNA12Q03113 381 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CDC16Q13042 620 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 STX5Q13190 355 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CUL3Q13618 768 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 BLMHQ13867 455 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ALFQ53S48 1182 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 TECRLQ5HYJ1 363 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 HECTD2Q5U5R9 776 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 RAP1GAP2Q684P5 730 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 TXNDC8Q6A555 127 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 IRGCQ6NXR0 463 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 EFL1Q7Z2Z2 1120 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 TFAP2DQ7Z6R9 452 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 TMC8Q8IU68 726 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CEP97Q8IW35 865 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ADGRG2Q8IZP9 1017 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SLC25A41Q8N5S1 370 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 CCNYL1Q8N7R7 359 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ARL14EPQ8N8R7 260 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 GOLM1Q8NBJ4 401 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 OR13J1Q8NGT2 312 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 OR6P1Q8NGX9 317 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 RHEBL1Q8TAI7 183 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 HEXDCQ8WVB3 486 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 USP13Q92995 863 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 IGSF8Q969P0 613 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 HDAC10Q969S8 669 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ZNF775Q96BV0 537 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 NXNL1Q96CM4 212 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 TCEAL4Q96EI5 215 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 L3HYPDHQ96EM0 354 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ZNF419Q96HQ0 510 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 MAELQ96JY0 434 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 ZNF570Q96NI8 536 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 PSKH2Q96QS6 385 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 PANX3Q96QZ0 392 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 NR1H4Q96RI1 486 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 ZNF184Q99676 751 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 SEMA3CQ99985 751 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MGME1Q9BQP7 344 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ADGRE3Q9BY15 652 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 VCXQ9H320 206 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 S100A14Q9HCY8 104 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 ZNF334Q9HCZ1 680 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 SPATS2LQ9NUQ6 558 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 NLE1Q9NVX2 485 aaPredicted RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 GDE1Q9NZC3 331 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
SDF2-206ENST00000587788 XPR1Q9UBH6 696 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SLC2A6Q9UGQ3 507 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SLC7A8Q9UHI5 535 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 AGO1Q9UL18 857 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 TBC1D30Q9Y2I9 924 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 MRPS23Q9Y3D9 190 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 COMMD10Q9Y6G5 202 aa5.71□□□□□ -1.5
SDF2-206ENST00000587788 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.71□□□□□ -1.5
SDF2-206ENST00000587788 NCOR1O75376 2440 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms