RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SVOPLQ8N434 492 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 DDHD1Q8NEL9 900 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 PDLIM5Q96HC4 596 aaKnown RBP18.38■□□□□ 0.53
DDX39A-206ENST00000587730 RNF145Q96MT1 663 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 ING2Q9H160 280 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 CPA4Q9UI42 421 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 FAM50BQ9Y247 325 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 MED16Q9Y2X0 877 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 TIMM22Q9Y584 194 aa18.38■□□□□ 0.53
DDX39A-206ENST00000587730 NPEPPSL1A6NEC2 478 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 OR6C75A6NL08 312 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 MGEA5O60502 916 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ESR1P03372 595 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 CCNA2P20248 432 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 LPOP22079 712 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 JAK1P23458 1154 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 HRH2P25021 359 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 THPOP40225 353 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 STT3AP46977 705 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 MAD2L1Q13257 205 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 PWP1Q13610 501 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 PTPRNQ16849 979 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 FUT11Q495W5 492 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SETMARQ53H47 684 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF598Q86UK7 904 aaKnown RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 DNAJB8Q8NHS0 232 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ITFG1Q8TB96 612 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 PROKR1Q8TCW9 393 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ZBTB18Q99592 522 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 CINPQ9BW66 212 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 GORASP2Q9H8Y8 452 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 CD274Q9NZQ7 290 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 UBA2Q9UBT2 640 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 GNPTGQ9UJJ9 305 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 PCDHGA11Q9Y5H2 935 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 MYO16Q9Y6X6 1858 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SLC12A8A0AV02 714 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 CDC7O00311 574 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 E2F3O00716 465 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ABCB7O75027 752 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SEC14L2O76054 403 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ATE1O95260 518 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SNAP29O95721 258 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 EOMESO95936 686 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 THRBP10828 461 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 TACR2P21452 398 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ACVRL1P37023 503 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ZNF157P51786 506 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SMARCB1Q12824 385 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 SFSWAPQ12872 951 aaKnown RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 PCBP2Q15366 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 CCL14Q16627 93 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 EML3Q32P44 896 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 THAP5Q7Z6K1 395 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 HDAC2Q92769 488 aaKnown RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 HSPBAP1Q96EW2 488 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 DCUN1D5Q9BTE7 237 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 ADGRE3Q9BY15 652 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 GPN2Q9H9Y4 310 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-206ENST00000587730 B3GNT3Q9Y2A9 372 aa18.37■□□□□ 0.53
DDX39A-206ENST00000587730 DOCK4Q8N1I0 1966 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 MUSKO15146 869 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 INSIG1O15503 277 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 S100BP04271 92 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-206ENST00000587730 ITGB1P05556 798 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 NCK1P16333 377 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 GGT1P19440 569 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 CASP2P42575 452 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 PTGER3P43115 390 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 C21orf59P57076 290 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 NKX3-2P78367 333 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 SKIV2LQ15477 1246 aaKnown RBP18.36■□□□□ 0.53
DDX39A-206ENST00000587730 DDR2Q16832 855 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 ADAMTSL2Q86TH1 951 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 ZDHHC13Q8IUH4 622 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 OFCC1Q8IZS5 231 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 C8orf59Q8N0T1 100 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-206ENST00000587730 PNPLA1Q8N8W4 532 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 OR4K2Q8NGD2 314 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 TBC1D15Q8TC07 691 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 RMDN1Q96DB5 314 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 COX4I2Q96KJ9 171 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 SPATA17Q96L03 361 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 TEX37Q96LM6 180 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 PPP3R2Q96LZ3 170 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 CGREF1Q99674 301 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 CREBZFQ9NS37 354 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 DNAJB9Q9UBS3 223 aa18.36■□□□□ 0.53
DDX39A-206ENST00000587730 C9JVG2 144 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 TBC1D4O60343 1298 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 KCNH1O95259 989 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 OTCP00480 354 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 ALPLP05186 524 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 OR4Q2P0C623 313 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 MAP4P27816 1152 aaKnown RBP18.35■□□□□ 0.53
DDX39A-206ENST00000587730 GNA12Q03113 381 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 DSC1Q08554 894 aa18.35■□□□□ 0.53
DDX39A-206ENST00000587730 RGMBQ6NW40 437 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms