RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TPM3P06753 285 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 VCLP18206 1134 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 PTPN3P26045 913 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 FOXK1P85037 733 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 GTF2H3Q13889 308 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 PRKD1Q15139 912 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-216ENST00000586813 LACTB2Q53H82 288 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-216ENST00000586813 LRRC38Q5VT99 294 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 RASGRP3Q8IV61 690 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 RHOT2Q8IXI1 618 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 OR8K1Q8NGG5 319 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 RNF25Q96BH1 459 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-216ENST00000586813 ZDHHC12Q96GR4 267 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 ELMO2Q96JJ3 720 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 UBP1Q9NZI7 540 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 KCTD3Q9Y597 815 aa19.01■□□□□ 0.63
TRAF4-216ENST00000586813 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 KIF1CO43896 1103 aaKnown RBP19■□□□□ 0.63
TRAF4-216ENST00000586813 KIAA0754O94854 1291 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 FGF5P12034 268 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 HMGCLP35914 325 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 TMEM115Q12893 351 aaPredicted RBP19■□□□□ 0.63
TRAF4-216ENST00000586813 ODF2Q5BJF6 829 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 CACHD1Q5VU97 1274 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 FAM92BQ6ZTR7 304 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 GDAP1Q8TB36 358 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 KLHL6Q8WZ60 621 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 TEKT5Q96M29 485 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 RAB33BQ9H082 229 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 TRIM10Q9UDY6 481 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 WDR37Q9Y2I8 494 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 PCDHB3Q9Y5E6 796 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 KCNMB2Q9Y691 235 aa19■□□□□ 0.63
TRAF4-216ENST00000586813 HALP42357 657 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 SRSF1Q07955 248 aaKnown RBP eCLIP18.99■□□□□ 0.631e-7■■■■□ 23.8
TRAF4-216ENST00000586813 TRIM14Q14142 442 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 NOMO1Q15155 1222 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 IGFBP7Q16270 282 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 IRGCQ6NXR0 463 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 MFSD7Q6UXD7 560 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 RHOT1Q8IXI2 618 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 BRSK1Q8TDC3 778 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 TRABDQ9H4I3 376 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 IL26Q9NPH9 171 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 SPTLC3Q9NUV7 552 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 ZNHIT6Q9NWK9 470 aaKnown RBP18.99■□□□□ 0.63
TRAF4-216ENST00000586813 DDX56Q9NY93 547 aaKnown RBP18.99■□□□□ 0.63
TRAF4-216ENST00000586813 EPHA6Q9UF33 1036 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 LNPEPQ9UIQ6 1025 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 TP53TG5Q9Y2B4 290 aa18.99■□□□□ 0.63
TRAF4-216ENST00000586813 LOC285095A0A1B0GVY8 99 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 SPAG6O75602 509 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 FURINP09958 794 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 TNNT1P13805 278 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 NELFEP18615 380 aaKnown RBP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 CD68P34810 354 aaPredicted RBP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 NR2C2P49116 596 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 WNT3AP56704 352 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 PPP1CAP62136 330 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 WASHC5Q12768 1159 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 ERV3-1Q14264 604 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 ZDHHC20Q5W0Z9 365 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 CYB5D1Q6P9G0 228 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 KDELC1Q6UW63 502 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 PPP1R3BQ86XI6 285 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 TTC30BQ8N4P2 665 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 GPR150Q8NGU9 434 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 TFB1MQ8WVM0 346 aaKnown RBP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 TTC25Q96NG3 672 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 CHP1Q99653 195 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 ZCCHC2Q9C0B9 1178 aaKnown RBP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 ABHD10Q9NUJ1 306 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 SAE1Q9UBE0 346 aaPredicted RBP18.98■□□□□ 0.63
TRAF4-216ENST00000586813 FAM153AQ9UHL3 310 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 KCND3Q9UK17 655 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 POLHQ9Y253 713 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 HYOU1Q9Y4L1 999 aa18.98■□□□□ 0.63
TRAF4-216ENST00000586813 NBASA2RRP1 2371 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 GPR39O43194 453 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 KCNJ13O60928 360 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 KATNA1O75449 491 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 PECAM1P16284 738 aaPredicted RBP18.97■□□□□ 0.63
TRAF4-216ENST00000586813 NFKB1P19838 968 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 FECHP22830 423 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 SPAM1P38567 509 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 CDKN2BP42772 138 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 SLC1A1P43005 524 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 CHRNA4P43681 627 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 DMPKQ09013 629 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 TAZQ16635 292 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 SIRPB2Q5JXA9 342 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 FAM151BQ6UXP7 276 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 BZW1Q7L1Q6 419 aaKnown RBP18.97■□□□□ 0.63
TRAF4-216ENST00000586813 AMZ2Q86W34 360 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 DTX3LQ8TDB6 740 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 SEMA5BQ9P283 1151 aa18.97■□□□□ 0.63
TRAF4-216ENST00000586813 IGHV5-51A0A0C4DH38 117 aa18.96■□□□□ 0.63
TRAF4-216ENST00000586813 TIAF1O95411 115 aa18.96■□□□□ 0.63
TRAF4-216ENST00000586813 EPOP01588 193 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms