RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PRIMA1Q86XR5 153 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CCDC170Q8IYT3 715 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 GLIS1Q8NBF1 620 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 TFB1MQ8WVM0 346 aaKnown RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 WDR24Q96S15 920 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 NUDT22Q9BRQ3 303 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 HERPUD2Q9BSE4 406 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 SPATA16Q9BXB7 569 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 GPR63Q9BZJ6 419 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CARD9Q9H257 536 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 SEMA6CQ9H3T2 930 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 RUBCNLQ9H714 662 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 GLOD4Q9HC38 313 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 LATS2Q9NRM7 1088 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 NFKBIL1Q9UBC1 381 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CNOT6Q9ULM6 557 aaKnown RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 PLEKHM1Q9Y4G2 1056 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 HYOU1Q9Y4L1 999 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 ALG6Q9Y672 507 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 IGHV1OR21-1A0A087WYE8 117 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 IGHV5-10-1A0A0J9YXX1 117 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TMEM200CA6NKL6 621 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 GPR89AB7ZAQ6 455 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PPM1DO15297 605 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CST8O60676 142 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SLC25A14O95258 325 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 LCA5LO95447 670 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 NDST3O95803 873 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 GPR89BP0CG08 455 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PTPN3P26045 913 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CD1CP29017 333 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CYLC1P35663 651 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PPM1FP49593 454 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 LIMK2P53671 638 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PRKD1Q15139 912 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SPA17Q15506 151 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 INPP5JQ15735 1006 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PCSK7Q16549 785 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TAZQ16635 292 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 NADK2Q4G0N4 442 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TFDP3Q5H9I0 405 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 KAZNQ674X7 775 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TCTN3Q6NUS6 607 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SPOCD1Q6ZMY3 1216 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 KDELC2Q7Z4H8 507 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PHYKPLQ8IUZ5 450 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 KATNAL2Q8IYT4 538 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SFRP1Q8N474 314 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TRAM1L1Q8N609 369 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 AVL9Q8NBF6 648 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CCDC112Q8NEF3 446 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 OR4D9Q8NGE8 314 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 OR10G6Q8NH81 332 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SLC37A2Q8TED4 501 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 P3H4Q92791 437 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SH3KBP1Q96B97 665 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TADA1Q96BN2 335 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 AHCYL2Q96HN2 611 aaKnown RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 RBM41Q96IZ5 413 aaKnown RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CALR3Q96L12 384 aaKnown RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 CCDC74BQ96LY2 380 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 TEKT5Q96M29 485 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 SLC38A3Q99624 504 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 ZNF711Q9Y462 761 aa10.98□□□□□ -0.65
CCDC47-206ENST00000584112 OAS3Q9Y6K5 1087 aaKnown RBP10.98□□□□□ -0.65
CCDC47-206ENST00000584112 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 POLEQ07864 2286 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 KIR2DS5A0A0G2JLQ3 304 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 A0A0G2JNG1 304 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 OR5K4A6NMS3 321 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 KIR2DS3K7RE56 304 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 GRID2O43424 1007 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 NUAK1O60285 661 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 PMPCBO75439 489 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 ZRANB2O95218 330 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 MT-CYBP00156 380 aaPredicted RBP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 SLC4A1P02730 911 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 ACP5P13686 325 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 CSTF2P33240 577 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 HHEXQ03014 270 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 CDC20Q12834 499 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 SEPT6Q14141 434 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 KIR2DS5Q14953 304 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 C16orf72Q14CZ0 275 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 ALS2CLQ60I27 953 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 C11orf63Q6NUN7 778 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 TMEM71Q6P5X7 295 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 TMC3Q7Z5M5 1100 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 SLC9B2Q86UD5 537 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 RCOR2Q8IZ40 523 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 AGBL5Q8NDL9 886 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 RCBTB1Q8NDN9 531 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms