RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NWD1Q149M9 1564 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 MED1Q15648 1581 aaPredicted RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 MSH6P52701 1360 aa4.34□□□□□ -1.72
NF1-220ENST00000581113 GCC2Q8IWJ2 1684 aa4.34□□□□□ -1.72
NF1-220ENST00000581113 ADAMTS13Q76LX8 1427 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 IGHV4OR15-8A0A075B7B6 117 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 PRSS44E7EML9 344 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 ZNF587BE7ETH6 402 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 AP3D1O14617 1153 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 OAS2P29728 719 aaKnown RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 TAS2R38P59533 333 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 ERVFC1-1P60608 527 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 PRAMEP78395 509 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 MRPS34P82930 218 aaKnown RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 TFAP4Q01664 338 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 RELQ04864 619 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 ADIPOQQ15848 244 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 SARM1Q6SZW1 724 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 C4orf50Q6ZRC1 276 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 GPR180Q86V85 440 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 NR2C2APQ86WQ0 139 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 RNF168Q8IYW5 571 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 RNF113BQ8IZP6 322 aaKnown RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 WDTC1Q8N5D0 677 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 KCNH5Q8NCM2 988 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 ABTB1Q969K4 478 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 ELMOD3Q96FG2 381 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 PCYT2Q99447 389 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 SEPT5Q99719 369 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 NCAPGQ9BPX3 1015 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 CSTL1Q9H114 145 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 STK39Q9UEW8 545 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 FBXL2Q9UKC9 423 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 ACSL5Q9ULC5 683 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 PADI3Q9ULW8 664 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 MAGED1Q9Y5V3 778 aaPredicted RBP4.33□□□□□ -1.72
NF1-220ENST00000581113 E9PCH4 1651 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 PIK3R4Q99570 1358 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 CKAP5Q14008 2032 aa4.33□□□□□ -1.72
NF1-220ENST00000581113 NAIPQ13075 1403 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 EME2A4GXA9 379 aaPredicted RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 TULP2O00295 520 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 HS3ST1O14792 307 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 ZBED4O75132 1171 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 GFPT2O94808 682 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 DDNO94850 711 aaPredicted RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 KCNK5O95279 499 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 FASLGP48023 281 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TAS2R40P59535 323 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 LRMPQ12912 555 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 PDE1CQ14123 709 aaPredicted RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 CRYMQ14894 314 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 DECR1Q16698 335 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 ZNF805Q5CZA5 627 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 IRAK1BP1Q5VVH5 260 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 BRAT1Q6PJG6 821 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TUBA1AQ71U36 451 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 C1orf87Q8N0U7 546 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TTC39CQ8N584 583 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 RBMXL3Q8N7X1 1067 aaKnown RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 ACVR1CQ8NER5 493 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 OR1J2Q8NGS2 313 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 BBS10Q8TAM1 723 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 SNRNP27Q8WVK2 155 aaKnown RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 SORCS1Q8WY21 1168 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TAAR8Q969N4 342 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TTC14Q96N46 770 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 QRFPRQ96P65 431 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 UBTD1Q9HAC8 227 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 SH3GLB2Q9NR46 395 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 BLOC1S4Q9NUP1 217 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 XIRP1Q702N8 1843 aaKnown RBP4.32□□□□□ -1.72
NF1-220ENST00000581113 DIP2AQ14689 1571 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 HFM1A2PYH4 1435 aa4.32□□□□□ -1.72
NF1-220ENST00000581113 FRMD3A2A2Y4 597 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 EIF4E1BA6NMX2 242 aaKnown RBP4.31□□□□□ -1.72
NF1-220ENST00000581113 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
NF1-220ENST00000581113 PRAC2D3DTV9 90 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 SCAMP1O15126 338 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 BUB3O43684 328 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 CLTBP09497 229 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 MYOD1P15172 320 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 TMEM11P17152 192 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 ITGA2P17301 1181 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
NF1-220ENST00000581113 MCM3P25205 808 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 CLK1P49759 484 aaKnown RBP4.31□□□□□ -1.72
NF1-220ENST00000581113 EIF5P55010 431 aaKnown RBP4.31□□□□□ -1.72
NF1-220ENST00000581113 ISL1P61371 349 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 ACSM2AQ08AH3 577 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 WASHC5Q12768 1159 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 ACSM2BQ68CK6 577 aa4.31□□□□□ -1.72
NF1-220ENST00000581113 MZT2BQ6NZ67 158 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms