RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 EPHA6Q9UF33 1036 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FBXO5Q9UKT4 447 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GRIN2DO15399 1336 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TULP3O75386 442 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RBMXL2O75526 392 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ECDO95905 644 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 AGTP01019 485 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 IFNGP01579 166 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HEXAP06865 529 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 C8GP07360 202 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FAM228BP0C875 321 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PABPC4LP0CB38 370 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TSHRP16473 764 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FBLP22087 321 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PPIBP23284 216 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CNR2P34972 360 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SOX6P35712 828 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GRK6P43250 576 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MAPK12P53778 367 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MAGOHP61326 146 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 NTHL1P78549 312 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DCTN2Q13561 401 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KRR1Q13601 381 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HEPACAMQ14CZ8 416 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PFKFB4Q16877 469 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCDC142Q17RM4 750 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TRIM71Q2Q1W2 868 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCDC153Q494R4 210 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FAM133BQ5BKY9 247 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FAM91A1Q658Y4 838 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ARHGAP17Q68EM7 881 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KIAA0895LQ68EN5 471 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RGS9BPQ6ZS82 235 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RASSF6Q6ZTQ3 369 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DGLUCYQ7Z3D6 616 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF280BQ86YH2 543 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 C12orf56Q8IXR9 622 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TCEAL8Q8IYN2 117 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ULK2Q8IYT8 1036 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CADM2Q8N3J6 435 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ATG16L2Q8NAA4 619 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SCAMP5Q8TAC9 235 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SLC22A8Q8TCC7 542 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ACTRT2Q8TDY3 377 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF483Q8TF39 744 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SNX33Q8WV41 574 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ANKRD7Q92527 254 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RUBCNQ92622 972 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TFGQ92734 400 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HIC2Q96JB3 615 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FER1L6-AS2Q96M78 137 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CEP295NLQ96MC4 621 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZSWIM3Q96MP5 696 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SMAD5Q99717 465 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HERPUD2Q9BSE4 406 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GPR62Q9BZJ7 368 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SLC25A51Q9H1U9 297 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 EFCAB1Q9HAE3 211 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PCDH12Q9NPG4 1184 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SEMA4BQ9NPR2 832 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FBXO6Q9NRD1 293 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MARK1Q9P0L2 795 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 UPB1Q9UBR1 384 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SNX12Q9UMY4 172 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SCML2Q9UQR0 700 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MTF2Q9Y483 593 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HS3ST4Q9Y661 456 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KNTC1P50748 2209 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TPRP12270 2363 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 C15orf38-AP3S2A0A0A6YYH1 394 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ESYT3A0FGR9 886 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 LINC01553A4QN01 128 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FFAR3O14843 346 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GPR42O15529 346 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GMFGO60234 142 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TRIM13O60858 407 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 B4GALT2O60909 372 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 STK16O75716 305 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KCNH1O95259 989 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TBX18O95935 607 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ALDOAP04075 364 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCDC166P0CW27 439 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CLUP10909 449 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CDK4P11802 303 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CD46P15529 392 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GNAZP19086 355 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 POLR2CP19387 275 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ITPKAP23677 461 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 BMP8BP34820 402 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RYKP34925 604 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCR8P51685 355 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 NME5P56597 212 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 OR4D2P58180 307 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DSG1Q02413 1049 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HSF2Q03933 536 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KLC1Q07866 573 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TBL3Q12788 808 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TBX2Q13207 712 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GRM7Q14831 915 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms