RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ACSS2Q9NR19 701 aa18.64■□□□□ 0.57
SCARF1-204ENST00000570902 DTLQ9NZJ0 730 aa18.64■□□□□ 0.57
SCARF1-204ENST00000570902 SEMA5BQ9P283 1151 aa18.64■□□□□ 0.57
SCARF1-204ENST00000570902 BZW2Q9Y6E2 419 aaKnown RBP18.64■□□□□ 0.57
SCARF1-204ENST00000570902 UNC79Q9P2D8 2635 aa18.64■□□□□ 0.57
SCARF1-204ENST00000570902 JCHAINP01591 159 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 PDE1BQ01064 536 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 GBE1Q04446 702 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 TMC3Q7Z5M5 1100 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 ZNF547Q8IVP9 402 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 LRRN4Q8WUT4 740 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 SHOC2Q9UQ13 582 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 MAP4K5Q9Y4K4 846 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 NOTCH2Q04721 2471 aa18.63■□□□□ 0.57
SCARF1-204ENST00000570902 ICE1Q9Y2F5 2266 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 KCNJ13O60928 360 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 TIAF1O95411 115 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 SLC4A1P02730 911 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 CYP1A2P05177 515 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 GJC1P36383 396 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 DRG2P55039 364 aaKnown RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 GTF2H3Q13889 308 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 SKOR2Q2VWA4 1001 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 PAPD7Q5XG87 772 aaKnown RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 LUZP1Q86V48 1076 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 KMT5CQ86Y97 462 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 FAF2Q96CS3 445 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 SRPK1Q96SB4 655 aaKnown RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 GPR63Q9BZJ6 419 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 XPO4Q9C0E2 1151 aaKnown RBP18.62■□□□□ 0.57
SCARF1-204ENST00000570902 CBX8Q9HC52 389 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 MLXIPLQ9NP71 852 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 ZNF711Q9Y462 761 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 PCDHGB7Q9Y5F8 929 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 MYO9AB2RTY4 2548 aa18.62■□□□□ 0.57
SCARF1-204ENST00000570902 IGHV5-51A0A0C4DH38 117 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 KCNK1O00180 336 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 MTX2O75431 263 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 SORBS2O94875 1100 aaKnown RBP18.61■□□□□ 0.57
SCARF1-204ENST00000570902 SERPINC1P01008 464 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 FOLR1P15328 257 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 FECHP22830 423 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 ARL4DP49703 201 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 IFI35P80217 286 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-204ENST00000570902 PPIDQ08752 370 aaKnown RBP18.61■□□□□ 0.57
SCARF1-204ENST00000570902 NADK2Q4G0N4 442 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 ATP13A4Q4VNC1 1196 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 CPZQ66K79 652 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 TRAPPC5Q8IUR0 188 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 ZNF514Q96K75 400 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-204ENST00000570902 VPS35Q96QK1 796 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 TRIB3Q96RU7 358 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 CD180Q99467 661 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 ING2Q9H160 280 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 TRIM10Q9UDY6 481 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 ZNF451Q9Y4E5 1061 aa18.61■□□□□ 0.57
SCARF1-204ENST00000570902 CPNE3O75131 537 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 SEMA7AO75326 666 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 DDAH2O95865 285 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 PIRTP0C851 137 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 BPIP17213 487 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 VARSP26640 1264 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 CCL11P51671 97 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 RPS18P62269 152 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 TPM4P67936 248 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 SLC10A2Q12908 348 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 KCNAB1Q14722 419 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 CHRNA6Q15825 494 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 FAM199XQ6PEV8 388 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 NT5DC3Q86UY8 548 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 PQLC3Q8N755 202 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 CNTD1Q8N815 330 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 BRSK1Q8TDC3 778 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 IMP4Q96G21 291 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 TTC25Q96NG3 672 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 RUFY1Q96T51 708 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 FGF21Q9NSA1 209 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 G3BP2Q9UN86 482 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 FARSAQ9Y285 508 aaKnown RBP18.6■□□□□ 0.57
SCARF1-204ENST00000570902 WDR37Q9Y2I8 494 aa18.6■□□□□ 0.57
SCARF1-204ENST00000570902 A0A1B0GTH6 734 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 ARGFXA6NJG6 315 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 ENO4A6NNW6 628 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 EBLN1P0CF75 366 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 LPOP22079 712 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-204ENST00000570902 PPP1CAP62136 330 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 HSD11B2P80365 405 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 CDK18Q07002 472 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 TMEM115Q12893 351 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-204ENST00000570902 ZBTB17Q13105 803 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 CHAF1BQ13112 559 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 PLCL1Q15111 1095 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 KHDC1Q4VXA5 237 aaKnown RBP18.59■□□□□ 0.57
SCARF1-204ENST00000570902 FIGNQ5HY92 759 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
SCARF1-204ENST00000570902 HGSNATQ68CP4 663 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 CCDC70Q6NSX1 233 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 C11orf96Q7Z7L8 435 aa18.59■□□□□ 0.57
SCARF1-204ENST00000570902 HPS6Q86YV9 775 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms