RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZFP64Q9NPA5 681 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CNOT8Q9UFF9 292 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 AMFRQ9UKV5 643 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SARDHQ9UL12 918 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CDH9Q9ULB4 789 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 OSGIN2Q9Y236 505 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 RCE1Q9Y256 329 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 KCTD3Q9Y597 815 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 OAS3Q9Y6K5 1087 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 COL4A6Q14031 1691 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SCN1AP35498 2009 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 GRID2IPA4D2P6 1211 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 M0QYT0 321 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 M0QYV0 167 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SYN3O14994 580 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 BUB1O43683 1085 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PALMO75781 387 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TIMP1P01033 207 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PSMB10P40306 273 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ACADSBP45954 432 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 RAP1GAPP47736 663 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 GABRB2P47870 512 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 CDH8P55286 799 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ITIH3Q06033 890 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 MESP2Q0VG99 397 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 BST2Q10589 180 aaKnown RBP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 CDC16Q13042 620 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TDGQ13569 410 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF268Q14587 947 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TAF11Q15544 211 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF766Q5HY98 468 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PLEKHA7Q6IQ23 1121 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 DNAJC24Q6P3W2 148 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PEX26Q7Z412 305 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SZRD1Q7Z422 152 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ERICH1Q86X53 443 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PALB2Q86YC2 1186 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 P3H2Q8IVL5 708 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 GSPT2Q8IYD1 628 aaKnown RBP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 THEM5Q8N1Q8 247 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 D2HGDHQ8N465 521 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 LRRC57Q8N9N7 239 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 LINC01356Q8N9X3 169 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 B3GALNT2Q8NCR0 500 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM125Q96AQ2 219 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PBKQ96KB5 322 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SENP8Q96LD8 212 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 NAP1L3Q99457 506 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ZSWIM1Q9BR11 485 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ACBD6Q9BR61 282 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 HERC2P3Q9BVR0 1158 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 NUP85Q9BW27 656 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 ELOVL4Q9GZR5 314 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM51Q9NW97 253 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TAS2R14Q9NYV8 317 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TRIM10Q9UDY6 481 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 CD207Q9UJ71 328 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 TSPAN16Q9UKR8 245 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 PCDHGB4Q9UN71 923 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.19□□□□□ -1.26
CNOT1-222ENST00000570139 DUSP10Q9Y6W6 482 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
CNOT1-222ENST00000570139 A0A0U1RQJ8 604 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 NPIPB15A6NHN6 443 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 C3orf70A6NLC5 250 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ZAR1LA6NP61 321 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 AGAP14A8MT82 685 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 H7C0S8 307 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 LEFTY2O00292 366 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 PPEF2O14830 753 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TNFSF14O43557 240 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 B3GAT3O94766 335 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TUBBP07437 444 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 SPARCP09486 303 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 MED14OSP0DP75 135 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 IL11P20809 199 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 NFKBIAP25963 317 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 NNMTP40261 264 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 RPL7AP62424 266 aaKnown RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 PPP2CBP62714 309 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 PPP2CAP67775 309 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 HHEXQ03014 270 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 PIGHQ14442 188 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-222ENST00000570139 GPNMBQ14956 572 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 RPS6KA1Q15418 735 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 CFAP221Q4G0U5 840 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 CLLU1OSQ5K130 101 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ARTNQ5T4W7 220 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 GPR139Q6DWJ6 353 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ARCQ7LC44 396 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 TAX1BP1Q86VP1 789 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ULK2Q8IYT8 1036 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 LGI4Q8N135 537 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 NIPA2Q8N8Q9 360 aa7.18□□□□□ -1.26
CNOT1-222ENST00000570139 ELP4Q96EB1 424 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms