RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 KLF1Q13351 362 aaPredicted RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 ESPL1Q14674 2120 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 DCAF17Q5H9S7 520 aaPredicted RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 C22orf39Q6P5X5 142 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 MACC1Q6ZN28 852 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 BEND5Q7L4P6 421 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 TMPRSS9Q7Z410 1059 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 VPS36Q86VN1 386 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 FSTL5Q8N475 847 aaPredicted RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 KLHL36Q8N4N3 616 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 Q8N9G6 341 aaPredicted RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 MIB2Q96AX9 1013 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 TMEM159Q96B96 161 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 CENPTQ96BT3 561 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 LCORQ96JN0 433 aaPredicted RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 TBATAQ96M53 351 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 CMKLR1Q99788 373 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 TRIM62Q9BVG3 475 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 POPDC2Q9HBU9 364 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 LUC7LQ9NQ29 371 aaKnown RBP5.67□□□□□ -1.5
CDH13-211ENST00000568770 COX16Q9P0S2 106 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 PRSS50Q9UI38 385 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 DNAI1Q9UI46 699 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 VPS51Q9UID3 782 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 TBC1D30Q9Y2I9 924 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 COQ4Q9Y3A0 265 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 HS3ST4Q9Y661 456 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 RNF215Q9Y6U7 377 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 PDZD2O15018 2839 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 ITPR3Q14573 2671 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
CDH13-211ENST00000568770 POLQO75417 2590 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SHANK1Q9Y566 2161 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 A0A0D9SEW6 157 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 C9orf118A6NHY6 69 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 STMND1H3BQB6 276 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 M0QYT0 321 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 MTSS1O43312 755 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 CNTN5O94779 1100 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 RHOBTB3O94955 611 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 MYL1P05976 194 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ALPIP09923 528 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SLC2A3P11169 496 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 CCL4P13236 92 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 CTSEP14091 401 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 LIFP15018 202 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 TBXAS1P24557 533 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 CD82P27701 267 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 GKP32189 559 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 HK3P52790 923 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 CDH4P55283 916 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 LGALS4P56470 323 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 YPEL5P62699 121 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 PCOLCEQ15113 449 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 PCBP2Q15366 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
CDH13-211ENST00000568770 ELOCQ15369 112 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 TAF5Q15542 800 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 UGT8Q16880 541 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 C5orf22Q49AR2 442 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ZCWPW2Q504Y3 356 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ALFQ53S48 1182 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 TOR2AQ5JU69 321 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 DENND1BQ6P3S1 775 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 LVRNQ6Q4G3 990 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 PARS2Q7L3T8 475 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 RD3Q7Z3Z2 195 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ZSCAN30Q86W11 494 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 GUF1Q8N442 669 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 DENND6BQ8NEG7 585 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 ASB12Q8WXK4 309 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 KAT5Q92993 513 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 TSACCQ96A04 125 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 MED15Q96RN5 788 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SMAD5Q99717 465 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 HEPHQ9BQS7 1158 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 MENTQ9BUN1 341 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 EDEM3Q9BZQ6 932 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SIK2Q9H0K1 926 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 QRSL1Q9H0R6 528 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 ZDHHC6Q9H6R6 413 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 MBNL1Q9NR56 388 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 CCM2LQ9NUG4 571 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 DDIT4Q9NX09 232 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SAE1Q9UBE0 346 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 APPL1Q9UKG1 709 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 GPR34Q9UPC5 381 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ITM2BQ9Y287 266 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 PCDHGA9Q9Y5G4 932 aaKnown RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 PCDHGA6Q9Y5G7 932 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 PCDHGA3Q9Y5H0 932 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 ADGRG4Q8IZF6 3080 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 SETD2Q9BYW2 2564 aaPredicted RBP5.66□□□□□ -1.5
CDH13-211ENST00000568770 C2CD3Q4AC94 2353 aa5.66□□□□□ -1.5
CDH13-211ENST00000568770 AKAP9Q99996 3911 aa5.65□□□□□ -1.5
CDH13-211ENST00000568770 A0A1B0GVL5 298 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms