RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 A0A087WUV0 522 aaPredicted RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 LNP1A1A4G5 178 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 H3BM21 787 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 SCAMP1O15126 338 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 CER1O95813 267 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 ENGP17813 658 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 GABRB3P28472 473 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 RXRGP48443 463 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 CD151P48509 253 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 PRLHRP49683 370 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 ADARP55265 1226 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 EIF3BP55884 814 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 HNRNPKP61978 463 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPG7-218ENST00000568205 NAB1Q13506 487 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 SF3A2Q15428 464 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 CSRP2Q16527 193 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 MAP9Q49MG5 647 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 SLC26A11Q86WA9 606 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 ZNF547Q8IVP9 402 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 CTAGE3PQ8IX95 158 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 PPM1NQ8N819 430 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 UHMK1Q8TAS1 419 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 GTPBP2Q9BX10 602 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 SLC13A1Q9BZW2 595 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 GAREM1Q9H706 876 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 CAAP1Q9H8G2 361 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 PARD6AQ9NPB6 346 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 TRNAU1APQ9NX07 287 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 APOBEC3BQ9UH17 382 aaKnown RBP15.49■□□□□ 0.07
SPG7-218ENST00000568205 RABGEF1Q9UJ41 708 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 GPR34Q9UPC5 381 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 CRYL1Q9Y2S2 319 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 GPSM3Q9Y4H4 160 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 PSAT1Q9Y617 370 aa15.49■□□□□ 0.07
SPG7-218ENST00000568205 A0A1B0GTQ1 180 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 F8W8V4 182 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 QSOX1O00391 747 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 KMOO15229 486 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 DFNA5O60443 496 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 HAUS5O94927 633 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 AHSGP02765 367 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 ESR1P03372 595 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 OR56A5P0C7T3 313 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 FMO4P31512 558 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 ATXN3P54252 364 aaPredicted RBP15.48■□□□□ 0.07
SPG7-218ENST00000568205 SLC29A2Q14542 456 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 EFTUD2Q15029 972 aaKnown RBP eCLIP15.48■□□□□ 0.079e-7■■□□□ 12.6
SPG7-218ENST00000568205 BRD3Q15059 726 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 SHBQ15464 509 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 UAP1Q16222 522 aaPredicted RBP15.48■□□□□ 0.07
SPG7-218ENST00000568205 CTSL3PQ5NE16 218 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 CNSTQ6PJW8 725 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 STRA8Q7Z7C7 330 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 C11orf96Q7Z7L8 435 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 DCLK2Q8N568 766 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 BEND7Q8N7W2 519 aaPredicted RBP15.48■□□□□ 0.07
SPG7-218ENST00000568205 OR2I1PQ8NGU4 316 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 UBLCP1Q8WVY7 318 aaPredicted RBP15.48■□□□□ 0.07
SPG7-218ENST00000568205 BIRC8Q96P09 236 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 LRRC61Q9BV99 259 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 TMEM168Q9H0V1 697 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 IL21RQ9HBE5 538 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 TM7SF3Q9NS93 570 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 SPASTQ9UBP0 616 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 GNPTGQ9UJJ9 305 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 PCDHB1Q9Y5F3 818 aa15.48■□□□□ 0.07
SPG7-218ENST00000568205 YKT6O15498 198 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 ERLIN1O75477 346 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 POP7O75817 140 aaKnown RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 PIAS2O75928 621 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 ACP5P13686 325 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 CTSEP14091 401 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 PKMP14618 531 aaKnown RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 TGM1P22735 817 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 EPHA8P29322 1005 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 ABCG1P45844 678 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 CCT8P50990 548 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 LRP8Q14114 963 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 KLHL38Q2WGJ6 581 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 PLA2G4EQ3MJ16 856 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 PRRT3Q5FWE3 981 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 PTRHD1Q6GMV3 140 aaKnown RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 CHST15Q7LFX5 561 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 FSTL5Q8N475 847 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 MINDY1Q8N5J2 469 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 ZNF548Q8NEK5 533 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 LINC00615Q96LM1 132 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 CPNE1Q99829 537 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 TIMM29Q9BSF4 260 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 TXNDC16Q9P2K2 825 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 SLC23A2Q9UGH3 650 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 PLEKHM1Q9Y4G2 1056 aa15.47■□□□□ 0.07
SPG7-218ENST00000568205 DNMT3AQ9Y6K1 912 aaPredicted RBP15.47■□□□□ 0.07
SPG7-218ENST00000568205 PCDH15Q96QU1 1955 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 CCDC151A5D8V7 595 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 H3BMM5 538 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 SDC3O75056 442 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 FTH1P02794 183 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms