RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 OLFM3Q96PB7 478 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 EPN3Q9H201 632 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 ZNF768Q9H5H4 540 aaKnown RBP18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 SLC40A1Q9NP59 571 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 WASH6PQ9NQA3 447 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 DDX56Q9NY93 547 aaKnown RBP18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 UBP1Q9NZI7 540 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 KCTD3Q9Y597 815 aa18.5■□□□□ 0.55
GTF3C1-207ENST00000567806 OR52A4PA6NMU1 304 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 CYSRT1A8MQ03 144 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 AKR1B15C9JRZ8 316 aaPredicted RBP18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 KCNJ13O60928 360 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 KATNA1O75449 491 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 NDUFA10O95299 355 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 CCNYL3P0C7X3 344 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 TNNT1P13805 278 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 BRAFP15056 766 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 ZNF28P17035 718 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 HALP42357 657 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 DRG2P55039 364 aaKnown RBP18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 SH3BP2P78314 561 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 CYB5D1Q6P9G0 228 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 TRAPPC5Q8IUR0 188 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 ZNF547Q8IVP9 402 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 RHOT2Q8IXI1 618 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 GALNT6Q8NCL4 622 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 RNF31Q96EP0 1072 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 CCDC42Q96M95 316 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 SPO11Q9Y5K1 396 aa18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 MRPS18BQ9Y676 258 aaKnown RBP18.49■□□□□ 0.55
GTF3C1-207ENST00000567806 AURKAO14965 403 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 NRDCO43847 1150 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 F8A1P23610 371 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 SLC1A1P43005 524 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 NR2C2P49116 596 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 GSDMDP57764 484 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 GPR18Q14330 331 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 ATP13A5Q4VNC0 1218 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 KHDC1Q4VXA5 237 aaKnown RBP18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 LACTB2Q53H82 288 aaPredicted RBP18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 ATP1A1-AS1Q5TC04 95 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 ZDHHC20Q5W0Z9 365 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 IRGCQ6NXR0 463 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 FAM92BQ6ZTR7 304 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 PRSS42Q7Z5A4 293 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 RHOT1Q8IXI2 618 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 TEKT5Q96M29 485 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 TRABDQ9H4I3 376 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 EPHA6Q9UF33 1036 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 FAM153AQ9UHL3 310 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 KCND3Q9UK17 655 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 CROTQ9UKG9 612 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 TMPRSS11EQ9UL52 423 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 PADI1Q9ULC6 663 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 BSNQ9UPA5 3926 aa18.48■□□□□ 0.55
GTF3C1-207ENST00000567806 PRR19A6NJB7 356 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 KIF1CO43896 1103 aaKnown RBP18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 SPAG6O75602 509 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 PTPN3P26045 913 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 HMGCLP35914 325 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 CAPZBP47756 277 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 TFDP2Q14188 446 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 ERV3-1Q14264 604 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 IGFBP7Q16270 282 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 MFSD7Q6UXD7 560 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 AMZ2Q86W34 360 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 PPP1R3BQ86XI6 285 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 TFB1MQ8WVM0 346 aaKnown RBP18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 KLHL6Q8WZ60 621 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 RSC1A1Q92681 617 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 PDE7BQ9NP56 450 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 LNPEPQ9UIQ6 1025 aa18.47■□□□□ 0.55
GTF3C1-207ENST00000567806 MTSS1O43312 755 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 POP7O75817 140 aaKnown RBP18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 EPOP01588 193 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 MT-ND3P03897 115 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 FGF5P12034 268 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 WNT3AP56704 352 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 FOXK1P85037 733 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 KLHL35Q6PF15 583 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 C11orf96Q7Z7L8 435 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 SLC25A41Q8N5S1 370 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 CHP1Q99653 195 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 ZCCHC2Q9C0B9 1178 aaKnown RBP18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 RAB33BQ9H082 229 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 NHEJ1Q9H9Q4 299 aaPredicted RBP18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 IL26Q9NPH9 171 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 SPTLC3Q9NUV7 552 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 SAE1Q9UBE0 346 aaPredicted RBP18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 POLHQ9Y253 713 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 WDR37Q9Y2I8 494 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 KCNMB2Q9Y691 235 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 MAST4O15021 2626 aa18.46■□□□□ 0.55
GTF3C1-207ENST00000567806 LOC285095A0A1B0GVY8 99 aa18.45■□□□□ 0.54
GTF3C1-207ENST00000567806 MKRN2OSH3BPM6 223 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms