RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 HTRA4P83105 476 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-213ENST00000566756 HPCAP84074 193 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 NFYCQ13952 458 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 NADSYN1Q6IA69 706 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 DHRS4L2Q6PKH6 230 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 C16orf59Q7L2K0 433 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 FAM81AQ8TBF8 368 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 KCNA7Q96RP8 456 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 ALG2Q9H553 416 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.6■□□□□ 0.25
CMTM3-213ENST00000566756 RIC8BQ9NVN3 520 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 SMOXQ9NWM0 555 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 PCTPQ9UKL6 214 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 AURKCQ9UQB9 309 aa16.6■□□□□ 0.25
CMTM3-213ENST00000566756 A0A1B0GTW7 788 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 C2orf81A6NN90 581 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 F5H5T6 163 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 NDUFS3O75489 264 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 SEC24AO95486 1093 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 TBX18O95935 607 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 CDK4P11802 303 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 HTR1EP28566 365 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 PCSK6P29122 969 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 ZFP36L2P47974 494 aaKnown RBP16.59■□□□□ 0.25
CMTM3-213ENST00000566756 GSK3BP49841 420 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 CLCN4P51793 760 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 ERVK-8P63133 956 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.25
CMTM3-213ENST00000566756 PTPRCAPQ14761 206 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 OTOP2Q7RTS6 562 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 PROSER1Q86XN7 944 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 LEMD2Q8NC56 503 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 OR56A4Q8NGH8 313 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
CMTM3-213ENST00000566756 IL1RL2Q9HB29 575 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 GMPR2Q9P2T1 348 aaKnown RBP16.59■□□□□ 0.25
CMTM3-213ENST00000566756 BPTFQ12830 3046 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
CMTM3-213ENST00000566756 UBA6A0AVT1 1052 aaPredicted RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 FAM234BA2RU67 622 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 SAC3D1A6NKF1 404 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 PLOD2O00469 737 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 ACOX3O15254 700 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 TLR5O60602 858 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 SNAP91O60641 907 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 VPS26AO75436 327 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 SLC22A3O75751 556 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 GJB5O95377 273 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 FGBP02675 491 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 ADARP55265 1226 aaKnown RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 PLOD1Q02809 727 aaPredicted RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 CREMQ03060 361 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 GNA12Q03113 381 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 ZBED5Q49AG3 693 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 ZNF512Q96ME7 567 aaPredicted RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 OCEL1Q9H607 264 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 SEMA4BQ9NPR2 832 aaPredicted RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 DDX18Q9NVP1 670 aaKnown RBP16.58■□□□□ 0.25
CMTM3-213ENST00000566756 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 ZNF639Q9UID6 485 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 BTRCQ9Y297 605 aa16.58■□□□□ 0.25
CMTM3-213ENST00000566756 IFRD1O00458 451 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 SNX2O60749 519 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 GJB3O75712 270 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 ENO2P09104 434 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 PKMP14618 531 aaKnown RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 HMGA1P17096 107 aaKnown RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 CR2P20023 1033 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 FMO4P31512 558 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 TTPAP49638 278 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 DIO3P55073 304 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 DCTN2Q13561 401 aaKnown RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 CAPRIN1Q14444 709 aaKnown RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 EML3Q32P44 896 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 TTC33Q6PID6 262 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 SYVN1Q86TM6 617 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 CIR1Q86X95 450 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 HOMEZQ8IX15 550 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 DPP10Q8N608 796 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 ZNF382Q96SR6 550 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 KCTD14Q9BQ13 255 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-213ENST00000566756 EGFL7Q9UHF1 273 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 ANAPC2Q9UJX6 822 aa16.58■□□□□ 0.24
CMTM3-213ENST00000566756 RNF103-CHMP3A0A140T963 221 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 ASPDHA6ND91 283 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 CCDC154A6NI56 674 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 GIPC1O14908 333 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 INSIG1O15503 277 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 KDELR3O43731 214 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 LILRB3O75022 631 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 POLR2JP52435 117 aaKnown RBP16.57■□□□□ 0.24
CMTM3-213ENST00000566756 CDH4P55283 916 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 NUP107P57740 925 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 EMX2Q04743 252 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 LIPEQ05469 1076 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 CYP51A1Q16850 503 aa16.57■□□□□ 0.24
CMTM3-213ENST00000566756 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms