RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GALNT7Q86SF2 657 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 KIAA1328Q86T90 577 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 TADA2BQ86TJ2 420 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CD302Q8IX05 232 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CCDC105Q8IYK2 499 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 MREGQ8N565 214 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RFWD2Q8NHY2 731 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 AENQ8WTP8 325 aaKnown RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CNOT9Q92600 299 aaKnown RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 P3H4Q92791 437 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 EXOC1Q9NV70 894 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ALKBH4Q9NXW9 302 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 STK39Q9UEW8 545 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SLC4A4Q9Y6R1 1079 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 MUC6Q6W4X9 2439 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RSPH10B2B2RC85 870 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 HAS3O00219 553 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SYF2O95926 243 aaKnown RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ICAM1P05362 532 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RSPH10BP0C881 870 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SCG2P13521 617 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 PAFAH1B1P43034 410 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 DCAF7P61962 342 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 GOLGA8FQ08AF8 430 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 GOLGA8DPQ0D2H9 430 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 MED22Q15528 200 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 Q4G0T1 1027 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CCDC91Q7Z6B0 441 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 NOXA1Q86UR1 476 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 C10orf67Q8IYJ2 551 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 PAQR4Q8N4S7 273 aaPredicted RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ARFGAP2Q8N6H7 521 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF713Q8N859 430 aaPredicted RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 MIGA1Q8NAN2 632 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SYN2Q92777 582 aaPredicted RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 CASP10Q92851 521 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 KLHL15Q96M94 604 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 WDFY2Q96P53 400 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RUFY1Q96T51 708 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 PIMREGQ9BSJ6 248 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 FUZQ9BT04 418 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 FTHL17Q9BXU8 183 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SLC13A4Q9UKG4 626 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 SNX12Q9UMY4 172 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 KCNJ14Q9UNX9 436 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ICKQ9UPZ9 632 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 HYOU1Q9Y4L1 999 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 RIPK3Q9Y572 518 aa4.28□□□□□ -1.72
LINC00561-201ENST00000565815 ADGRA3Q8IWK6 1321 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 A6NCN8 305 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 LRRIQ3A6PVS8 624 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 HSF2BPO75031 334 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 RHOXF2BP0C7M4 288 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 CCNE1P24864 410 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 EPHB2P29323 1055 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 PBX3P40426 434 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 GTF2A1P52655 376 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 UFM1P61960 85 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF91Q05481 1191 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 TOMM20Q15388 145 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 FAM171A1Q5VUB5 890 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 KLHL10Q6JEL2 608 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 AMER2Q8N7J2 671 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 ATP8B4Q8TF62 1192 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 RAB40AQ8WXH6 277 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 RHOXF2Q9BQY4 288 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 INTS2Q9H0H0 1204 aaKnown RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 MFSD1Q9H3U5 465 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 SLC25A10Q9UBX3 287 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 PRRC2BQ5JSZ5 2229 aaKnown RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 NCOR1O75376 2440 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 PTPRSQ13332 1948 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 SMIM35A0A1B0GVV1 85 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 PVALEFA0A1B0GWK0 134 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 TTC26A0AVF1 554 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 NEURL1O76050 574 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 DDAH2O95865 285 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 MMP3P08254 477 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 EPHA8P29322 1005 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 RPS6KA3P51812 740 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 VCPP55072 806 aaKnown RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 NLRP5P59047 1200 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 EFNB1P98172 346 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 CNTN2Q02246 1040 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 CFHR1Q03591 330 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 TROAPQ12815 778 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF528Q3MIS6 628 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 SPDYCQ5MJ68 293 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 ENTPD8Q5MY95 495 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 C10orf76Q5T2E6 689 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 FAAH2Q6GMR7 532 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 LRIG3Q6UXM1 1119 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC50Q8IVM0 306 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 FBXO16Q8IX29 292 aaPredicted RBP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 IFT20Q8IY31 132 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 MYOCDQ8IZQ8 938 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms