RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PLET1Q6UQ28 207 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 HID1Q8IV36 788 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CACNG4Q9UBN1 327 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 SERPINA1P01009 418 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CCNCP24863 283 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CTSKP43235 329 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 TMBIM6P55061 237 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 IL18R1Q13478 541 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 ADCK2Q7Z695 626 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 RIOX2Q8IUF8 465 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CLIP4Q8N3C7 705 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 KDM1BQ8NB78 822 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 SLC45A3Q96JT2 553 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 NSMCE3Q96MG7 304 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 COPS4Q9BT78 406 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 ANKRD60Q9BZ19 345 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 PCDHGA7Q9Y5G6 932 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TSPAN9O75954 239 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 DIRAS1O95057 198 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ALDH3A2P51648 485 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 OR2B6P58173 313 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CDC42P60953 191 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 KCNAB2Q13303 367 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 GRB7Q14451 532 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 FAM131AQ6UXB0 335 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 LPPQ93052 612 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 IPPKQ9H8X2 491 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 FBXW11Q9UKB1 542 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TSPAN1O60635 241 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 OXSR1O95747 527 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 UROSP10746 265 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CDH1P12830 882 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TALDO1P37837 337 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 GNPDA1P46926 289 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 HLCSP50747 726 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 IST1P53990 364 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PAQR3Q6TCH7 311 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 B3GNT9Q6UX72 402 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PLEKHM3Q6ZWE6 761 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 FOPNLQ96NB1 174 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 SLC39A8Q9C0K1 460 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 A0A1W2PP18 115 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 FAM220BPB1ANY3 271 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 IFRD1O00458 451 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PLOD2O00469 737 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 MATN3O15232 486 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ENO2P09104 434 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 SMIM18P0DKX4 95 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 POU2F1P14859 743 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 OPRL1P41146 370 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 HSPA7P48741 367 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 EEFSECP57772 596 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TXNL4AP83876 142 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CDH18Q13634 790 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 GRM2Q14416 872 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TYSND1Q2T9J0 566 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 SLC39A12Q504Y0 691 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ABHD11Q8NFV4 315 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 MED8Q96G25 268 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF597Q96LX8 424 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CGREF1Q99674 301 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 FUNDC2Q9BWH2 189 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ZYG11BQ9C0D3 744 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CRISPLD1Q9H336 500 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 MARCH2Q9P0N8 246 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 PRSS51A0A1B0GVH4 220 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TRIM64CA6NLI5 447 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 BTBD19C9JJ37 291 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ENPP3O14638 875 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 ELP6Q0PNE2 266 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 TREML2Q5T2D2 321 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 CYS1Q717R9 158 aa12.48□□□□□ -0.41
COMMD4-209ENST00000564068 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
COMMD4-209ENST00000564068 MAVSQ7Z434 540 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms