RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 WASH6PQ9NQA3 447 aa20.53■□□□□ 0.88
HERC2-204ENST00000563945 RARRES3Q9UL19 164 aa20.53■□□□□ 0.88
HERC2-204ENST00000563945 MAN2B2Q9Y2E5 1009 aa20.53■□□□□ 0.88
HERC2-204ENST00000563945 MTSS1O43312 755 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 CREG1O75629 220 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 BPIP17213 487 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 NR1D1P20393 614 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 MESDQ14696 234 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 IQCB1Q15051 598 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 CAVIN1Q6NZI2 390 aaKnown RBP20.52■□□□□ 0.88
HERC2-204ENST00000563945 EFCAB3Q8N7B9 438 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 KLHL6Q8WZ60 621 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 SEC14L1Q92503 715 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 TRIB3Q96RU7 358 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 BRD8Q9H0E9 1235 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 EPHA6Q9UF33 1036 aa20.52■□□□□ 0.88
HERC2-204ENST00000563945 KCNJ13O60928 360 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 NDST3O95803 873 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 RECKO95980 971 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 NELFEP18615 380 aaKnown RBP20.51■□□□□ 0.87
HERC2-204ENST00000563945 PDE1BQ01064 536 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 TMEM115Q12893 351 aaPredicted RBP20.51■□□□□ 0.87
HERC2-204ENST00000563945 UBXN4Q92575 508 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 MIB2Q96AX9 1013 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 VPS35Q96QK1 796 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 ZCCHC2Q9C0B9 1178 aaKnown RBP20.51■□□□□ 0.87
HERC2-204ENST00000563945 RAB33BQ9H082 229 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 LRRC4CQ9HCJ2 640 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 BPIFA1Q9NP55 256 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 LHX9Q9NQ69 397 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 TLK1Q9UKI8 766 aa20.51■□□□□ 0.87
HERC2-204ENST00000563945 C21orf140B9A014 251 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 VPS4BO75351 444 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 PMPCBO75439 489 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 FURINP09958 794 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 BRAFP15056 766 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 PMS2P54278 862 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 MLLT10P55197 1068 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 ACY1Q03154 408 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 TUBB3Q13509 450 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 AMZ2Q86W34 360 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 BPHLQ86WA6 291 aaPredicted RBP20.5■□□□□ 0.87
HERC2-204ENST00000563945 RFX6Q8HWS3 928 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 PLD5Q8N7P1 536 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 FCRL4Q96PJ5 515 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 GLOD4Q9HC38 313 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 VPS4AQ9UN37 437 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 PCDHGA6Q9Y5G7 932 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 COL12A1Q99715 3063 aa20.5■□□□□ 0.87
HERC2-204ENST00000563945 BSNQ9UPA5 3926 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 A0A0A6YYK5 440 aaPredicted RBP20.49■□□□□ 0.87
HERC2-204ENST00000563945 ZNF487B1APH4 448 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 PBX1P40424 430 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 RPS15P62841 145 aaKnown RBP20.49■□□□□ 0.87
HERC2-204ENST00000563945 PLCL1Q15111 1095 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 SLC14A2Q15849 920 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 ATP13A5Q4VNC0 1218 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 TEX44Q53QW1 395 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 ZDHHC20Q5W0Z9 365 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 ZNF547Q8IVP9 402 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 SPATA22Q8NHS9 363 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 CT55Q8WUE5 264 aa20.49■□□□□ 0.87
HERC2-204ENST00000563945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.49■□□□□ 0.87
HERC2-204ENST00000563945 RP1L1Q8IWN7 2480 aaPredicted RBP20.49■□□□□ 0.87
HERC2-204ENST00000563945 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 TTLL8A6PVC2 850 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 POP7O75817 140 aaKnown RBP20.48■□□□□ 0.87
HERC2-204ENST00000563945 MT-CYBP00156 380 aaPredicted RBP20.48■□□□□ 0.87
HERC2-204ENST00000563945 FECHP22830 423 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 DYNLT1P63172 113 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 PPP2R5EQ16537 467 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 SLC18A3Q16572 532 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 FAM182AQ5T1J6 154 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 BZW1Q7L1Q6 419 aaKnown RBP20.48■□□□□ 0.87
HERC2-204ENST00000563945 TMEM135Q86UB9 458 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 VSIG1Q86XK7 387 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 GPR87Q9BY21 358 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 TRABDQ9H4I3 376 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 UBP1Q9NZI7 540 aa20.48■□□□□ 0.87
HERC2-204ENST00000563945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.48■□□□□ 0.87
HERC2-204ENST00000563945 IGHV5-51A0A0C4DH38 117 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 UBA6A0AVT1 1052 aaPredicted RBP20.47■□□□□ 0.87
HERC2-204ENST00000563945 CLEC18AA5D8T8 446 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 K7EM74 188 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 KRT1P04264 644 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 TPM3P06753 285 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 CD97P48960 835 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 KHDC1Q4VXA5 237 aaKnown RBP20.47■□□□□ 0.87
HERC2-204ENST00000563945 LDLRAP1Q5SW96 308 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 ARMC6Q6NXE6 501 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 CLEC18BQ6UXF7 455 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 NPNTQ6UXI9 565 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 LUZP1Q86V48 1076 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 KMT5CQ86Y97 462 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 APLFQ8IW19 511 aaPredicted RBP20.47■□□□□ 0.87
HERC2-204ENST00000563945 CLEC18CQ8NCF0 446 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 THAP4Q8WY91 577 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms