RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TM7SF3Q9NS93 570 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 DNAAF2Q9NVR5 837 aaKnown RBP18.56■□□□□ 0.56
RAB40C-207ENST00000563109 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 GNPTGQ9UJJ9 305 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 FBXO5Q9UKT4 447 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 DOLKQ9UPQ8 538 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 PRKAB1Q9Y478 270 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 TDRD6O60522 2096 aaKnown RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 TCRBV9S1A1TA0A576 114 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 AQP9O43315 295 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 OR1I1O60431 355 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 FTH1P02794 183 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 FAM153BP0C7A2 387 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 MYBL2P10244 700 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 TGM1P22735 817 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 PRLHRP49683 370 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 CTSCP53634 463 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 EIF3BP55884 814 aaKnown RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 CTBP1Q13363 440 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 SUZ12Q15022 739 aaKnown RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 KYNUQ16719 465 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 PLA2G4EQ3MJ16 856 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 FAM153CQ494X1 144 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 PTRHD1Q6GMV3 140 aaKnown RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 TRMT10CQ7L0Y3 403 aaKnown RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 CHST15Q7LFX5 561 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 GKN2Q86XP6 184 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 C2CD4AQ8NCU7 369 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 SGF29Q96ES7 293 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 CCDC97Q96F63 343 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 TIMM29Q9BSF4 260 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 TMEM168Q9H0V1 697 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 CCDC68Q9H2F9 335 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 FBXO6Q9NRD1 293 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-207ENST00000563109 PCDHB1Q9Y5F3 818 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 GPR179Q6PRD1 2367 aa18.55■□□□□ 0.56
RAB40C-207ENST00000563109 OTOGLQ3ZCN5 2332 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 USP34Q70CQ2 3546 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 KLHL33A6NCF5 533 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 NEMP2A6NFY4 417 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 H3BMM5 538 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 ACSL3O95573 720 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 FUCA1P04066 466 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 ACP5P13686 325 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 RPS3P23396 243 aaKnown RBP eCLIP18.54■□□□□ 0.56
RAB40C-207ENST00000563109 DGKAP23743 735 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 PBLDP30039 288 aaPredicted RBP18.54■□□□□ 0.56
RAB40C-207ENST00000563109 PMS2P54278 862 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 MPP1Q00013 466 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 SHBQ15464 509 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 TCEA2Q15560 299 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 TEDDM1Q5T9Z0 273 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 CYS1Q717R9 158 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 SLC26A11Q86WA9 606 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 SDR16C5Q8N3Y7 309 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 CLDN19Q8N6F1 224 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 PNPLA1Q8N8W4 532 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 FBF1Q8TES7 1133 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 LPGAT1Q92604 370 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 TXNDC16Q9P2K2 825 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 PCDHGB2Q9Y5G2 931 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 DNMT3AQ9Y6K1 912 aaPredicted RBP18.54■□□□□ 0.56
RAB40C-207ENST00000563109 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
RAB40C-207ENST00000563109 PCDHGA12O60330 932 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 KCNJ13O60928 360 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 S1PR4O95977 384 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ESR1P03372 595 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ANXA6P08133 673 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 GSTM1P09488 218 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ALPPL2P10696 532 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ADARP55265 1226 aaKnown RBP18.53■□□□□ 0.56
RAB40C-207ENST00000563109 GSTM4Q03013 218 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 BNIP3Q12983 259 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 NAB1Q13506 487 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 C1orf61Q13536 156 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 GALNT7Q86SF2 657 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 AMZ2Q86W34 360 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ZNF547Q8IVP9 402 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 CTAGE3PQ8IX95 158 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 SAP25Q8TEE9 199 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 PARD6BQ9BYG5 372 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 CRYL1Q9Y2S2 319 aa18.53■□□□□ 0.56
RAB40C-207ENST00000563109 PCYT1BQ9Y5K3 369 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-207ENST00000563109 ZFC3H1O60293 1989 aaKnown RBP18.53■□□□□ 0.56
RAB40C-207ENST00000563109 BPTFQ12830 3046 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 MYO15AQ9UKN7 3530 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 FAM159BA6NKW6 160 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 CDX4O14627 284 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 POP7O75817 140 aaKnown RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 FMO4P31512 558 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 ACTR1BP42025 376 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 LEPRP48357 1165 aaKnown RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 CD151P48509 253 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 ACTR1AP61163 376 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 CTBSQ01459 385 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 ILF2Q12905 390 aaKnown RBP18.52■□□□□ 0.56
RAB40C-207ENST00000563109 SLC14A1Q13336 389 aa18.52■□□□□ 0.56
RAB40C-207ENST00000563109 UAP1L1Q3KQV9 507 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms