RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 GDAP1Q8TB36 358 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 NUP85Q9BW27 656 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 KLHL25Q9H0H3 589 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC40A1Q9NP59 571 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 ERRFI1Q9UJM3 462 aaPredicted RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 RARRES3Q9UL19 164 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SPO11Q9Y5K1 396 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SCINQ9Y6U3 715 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 APCP25054 2843 aa11.46□□□□□ -0.58
NSMCE1-202ENST00000561960 ANKRD17O75179 2603 aaKnown RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 ADGRG4Q8IZF6 3080 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 DCHS2Q6V1P9 2916 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 BUD23O43709 281 aaKnown RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 PYGLP06737 847 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 BPIP17213 487 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 PTPN4P29074 926 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 ARL4DP49703 201 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TAS2R40P59535 323 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 IL11RAQ14626 422 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 PLCL1Q15111 1095 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT8Q16880 541 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 CRTC2Q53ET0 693 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 RALGPS1Q5JS13 557 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 NPNTQ6UXI9 565 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 DET1Q7L5Y6 550 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM126BQ8IUX1 230 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 APLFQ8IW19 511 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM151BQ8IW70 566 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 BEND7Q8N7W2 519 aaPredicted RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 ENDOVQ8N8Q3 282 aaKnown RBP11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 SPATA22Q8NHS9 363 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 KLHL6Q8WZ60 621 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 MAML1Q92585 1016 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 GLYATL1Q969I3 302 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TLR10Q9BXR5 811 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 GPR63Q9BZJ6 419 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 CHST8Q9H2A9 424 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 RMI1Q9H9A7 625 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TRIM39Q9HCM9 518 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 PDE7BQ9NP56 450 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 SLAMF7Q9NQ25 335 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 FGF21Q9NSA1 209 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 TACC2O95359 2948 aa11.45□□□□□ -0.58
NSMCE1-202ENST00000561960 NUP210LQ5VU65 1888 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 DOCK10Q96BY6 2186 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ZGRF1Q86YA3 2104 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 OR2AG2A6NM03 316 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 OR5K4A6NMS3 321 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ANKRD66B4E2M5 251 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 KMOO15229 486 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 SCRG1O75711 98 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 CDK14O94921 469 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ITGA1P56199 1179 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 RPS15P62841 145 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 LAMB3Q13751 1172 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 NFE2L1Q14494 772 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 PTCHD3Q3KNS1 767 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ATP13A5Q4VNC0 1218 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 BOLA3Q53S33 107 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 DNTTIP2Q5QJE6 756 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ZFYVE27Q5T4F4 411 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 SLC6A19Q695T7 634 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 CISD2Q8N5K1 135 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 RBMXL3Q8N7X1 1067 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 AGAP3Q96P47 875 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 EPB41L1Q9H4G0 881 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 LMBRD1Q9NUN5 540 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 IMP3Q9NV31 184 aaKnown RBP11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 SOHLH2Q9NX45 425 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 PCDHGA6Q9Y5G7 932 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 HEY1Q9Y5J3 304 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 FBN2P35556 2912 aa11.44□□□□□ -0.58
NSMCE1-202ENST00000561960 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CHUKO15111 745 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A9O60656 530 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 PMPCBO75439 489 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 MT-CYBP00156 380 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A6P19224 532 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 IDSP22304 550 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A1P22309 533 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A4P22310 534 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CA4P22748 312 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ARSEP51690 589 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CLCNKAP51800 687 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ZNF135P52742 658 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CTSCP53634 463 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CDK18Q07002 472 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 AP1B1Q10567 949 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms