RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 TUBBP07437 444 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 IVLP07476 585 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 GNSP15586 552 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF8P17098 575 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 GABRB3P28472 473 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 AKT1P31749 480 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 PHBP35232 272 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 HSD17B3P37058 310 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ABCG1P45844 678 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 POLD2P49005 469 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TTPAP49638 278 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CSNK1EP49674 416 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRLHRP49683 370 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 THOP1P52888 689 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CTSCP53634 463 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 GRIK2Q13002 908 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CTBP1Q13363 440 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 THOC5Q13769 683 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CCDC6Q16204 474 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 OCLNQ16625 522 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 DUOXA1Q1HG43 343 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 BCL7AQ4VC05 210 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 AARS2Q5JTZ9 985 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CTSL3PQ5NE16 218 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 RNF187Q5TA31 235 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TCEAL6Q6IPX3 200 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 MRNIPQ6NTE8 343 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC23A3Q6PIS1 610 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CERS6Q6ZMG9 384 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 KIAA0408Q6ZU52 694 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 C3orf62Q6ZUJ4 267 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TAS2R42Q7RTR8 314 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 RABEPKQ7Z6M1 372 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 C11orf96Q7Z7L8 435 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 GALNT7Q86SF2 657 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 PARGQ86W56 976 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC26A11Q86WA9 606 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF547Q8IVP9 402 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 RBFAQ8N0V3 343 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 OTUD6BQ8N6M0 293 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR56A4Q8NGH8 313 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 UHMK1Q8TAS1 419 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 LKAAEAR1Q8TD35 194 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 CALML6Q8TD86 181 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ATOH1Q92858 354 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TCEAL3Q969E4 200 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 KLHDC7BQ96G42 594 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 COPS8Q99627 209 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 IRF2BPLQ9H1B7 796 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR2AG1Q9H205 316 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ARRDC1-AS1Q9H2J1 176 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TCEAL2Q9H3H9 227 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 INTS10Q9NVR2 710 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 KLQ9UEF7 1012 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 FBXO5Q9UKT4 447 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 RAB23Q9ULC3 237 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 ANKRD6Q9Y2G4 727 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 TMEM98Q9Y2Y6 226 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 HCN4Q9Y3Q4 1203 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 SNX11Q9Y5W9 270 aa6.94□□□□□ -1.3
CTDSPL2-210ENST00000560834 PIKFYVEQ9Y2I7 2098 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 A0A087WUV0 522 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRR19A6NJB7 356 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR2AG2A6NM03 316 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 GPR89AB7ZAQ6 455 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PROB1E7EW31 1015 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TNFRSF10CO14798 259 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 NUAK1O60285 661 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 MAGEC1O60732 1142 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 AHSGP02765 367 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 SHBGP04278 402 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 CFIP05156 583 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 RETP07949 1114 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 GPR89BP0CG08 455 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ATP1B2P14415 290 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 H2AFXP16104 143 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 MSH3P20585 1137 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 KELP23276 732 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 RPS3P23396 243 aaKnown RBP eCLIP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 HTR1BP28222 390 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 GCAP28676 217 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 NSG1P42857 185 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 LEPRP48357 1165 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 ADARP55265 1226 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 SRP54P61011 504 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 NHLH1Q02575 133 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 NAB1Q13506 487 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 PTK2BQ14289 1009 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 BRD3Q15059 726 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 SHBQ15464 509 aa6.93□□□□□ -1.3
CTDSPL2-210ENST00000560834 TEAD4Q15561 434 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms