RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TUBGCP2Q9BSJ2 902 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 MLPHQ9BV36 600 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 NLNQ9BYT8 704 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ILKAPQ9H0C8 392 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 CHST8Q9H2A9 424 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 OSGEPL1Q9H4B0 414 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TRIM39Q9HCM9 518 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SLC40A1Q9NP59 571 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 FGF21Q9NSA1 209 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 HAUS2Q9NVX0 235 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SCHIP1Q9P0W5 487 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 ZNF624Q9P2J8 865 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 ATXN10Q9UBB4 475 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 NOCTQ9UK39 431 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 ITGB1BP2Q9UKP3 347 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TCFL5Q9UL49 500 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SIK3Q9Y2K2 1263 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 POLEQ07864 2286 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SVILO95425 2214 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 MYO7BQ6PIF6 2116 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 POLQO75417 2590 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 IGHV5-51A0A0C4DH38 117 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 A0A0U1RQS6 177 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 UBA6A0AVT1 1052 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 PDZK1P1A8MUH7 402 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 F5H423 210 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 F8VZ95 297 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MEN1O00255 615 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PEX12O00623 359 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KMOO15229 486 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 FZD6O60353 706 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KCNJ13O60928 360 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 SCRG1O75711 98 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 RNF8O76064 485 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MTA2O94776 668 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 SLC25A14O95258 325 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 CLDN7O95471 211 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PDHA1P08559 390 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 EBLN1P0CF75 366 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ZNF7P17097 686 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 ZNF8P17098 575 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 VCLP18206 1134 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CA4P22748 312 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PSMA2P25787 234 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 SOX5P35711 763 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 HADHAP40939 763 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MMP13P45452 471 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CAPZBP47756 277 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 SPINT3P49223 89 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CDH6P55285 790 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MAXP61244 160 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 RPL26P61254 145 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 RPL7AP62424 266 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 TUBB4BP68371 445 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ART3Q13508 389 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 LAMB3Q13751 1172 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 TUBB2AQ13885 445 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 SSPNQ14714 243 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KCNAB1Q14722 419 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PLCL1Q15111 1095 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KYNUQ16719 465 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 INSCQ1MX18 579 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CLEC16AQ2KHT3 1053 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 TDRD12Q587J7 1177 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 ANKRD20A8PQ5CZ79 823 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PPP6R3Q5H9R7 873 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MIIPQ5JXC2 388 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PLEKHS1Q5SXH7 462 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 AGAP9Q5VTM2 703 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 HGSNATQ68CP4 663 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ARMC6Q6NXE6 501 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ZNF517Q6ZMY9 492 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 GDF7Q7Z4P5 450 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 LRRTM4Q86VH4 590 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KCNMB4Q86W47 210 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 RAB43Q86YS6 212 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 LRRC49Q8IUZ0 686 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 DSELQ8IZU8 1212 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PGBD5Q8N414 524 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 D2HGDHQ8N465 521 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ZBTB2Q8N680 514 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ENDOVQ8N8Q3 282 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 MLKLQ8NB16 471 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CPT1BQ92523 772 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 RSC1A1Q92681 617 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 HDAC11Q96DB2 347 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CLIP3Q96DZ5 547 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 MCEEQ96PE7 176 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 KCTD15Q96SI1 283 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 PCDHB18PQ96TA0 734 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CD180Q99467 661 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 BARD1Q99728 777 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 MAP3K3Q99759 626 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 TUBB2BQ9BVA1 445 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 OR2AG1Q9H205 316 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ZWILCHQ9H900 591 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 FANCEQ9HB96 536 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 NT5MQ9NPB1 228 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms